Template-based Modeling Results for SLMA_ECOLI


  Submitted Primary Sequence

>Length 198
MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
553432233211220011001200232113301012003102001000021031112002100210121012102201433331221022002000000241111010000111223233021102200220121022003222233231220122000000000010000100213232302210211021013314
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
1MUSTER2f07A0.1240.9802.009threading_1-PFTMPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAI---DHSMEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERFYIGFEQENVEVYKKEIFTFLKRSLG
2SPARKS3lhqa0.1771.0002.368threading_2MARKTKQQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVTRGAIYWHFKNKSDLFSEIWELSESNIGELEIEYQAKPDDPLSVLREILVHILEATVTEERRRLLMEIIFFVGEMVVVQQAQRSLCLESYDRIEQTLKHCINAKMLPENLLTRRAAILMRSFISGLMENWLFAPQSFDLKKEARAYVTILLEMYQ
3PROSPECT22f07A0.1340.9802.367threading_3PFTMPKQTSGKYEKILQA-AIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDHS---MEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERFYIGFEDENVEVYKKEIFTFLKRSLG
4PPA-I2f07A0.1190.9801.685threading_4-PFTMPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHGDEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDHS---MEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERFYIGFEDENVEVYKKEIFTFLKRSLG
5HHPRED-l1vi0_A0.1770.9141.542threading_5---------PKY-QIID-AAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEK-GQFIER-EEDIKEKATAKEKLALVISKHFSLLAGDHNLAIVTQL-ELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQ-IFGTIDETVTTWV-NDQKYDLVALSNSVLELLVSGI-
6HHPRED-g1vi0_A0.1760.9191.390threading_6---------PKY-QII-DAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEK-GQFIER-EEDIKEKATAKEKLALVISKHFSLLAGDHNLAIVTQLE-LRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQ-IFGTIDETVTTWV-NDQKYDLVALSNSVLELLVSGIH
7SP33lhqa0.1771.0002.389threading_7MARKTKQQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVTRGAIYWHFKNKSDLFSEIWELSESNIGELEIEYQAKPDDPLSVLREILVHILEATVTEERRRLLMEIIFHKCEFVVVQQAQRSLCLESYDRIEQTLKHCINAKMLPENLLTRRAAILMRSFISGLMENWLFAPQSFDLKKEARAYVTILLEMYQ
8SAM-T993nxcA0.9660.8941.990threading_8--------RNRREEILQSLALML------ESITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGH------ARLQGRINQLFERIEAQLRQVLREKRMREGGYAT-DETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
9MUSTER2pbxA0.1280.9851.954threading_9IEKRPRTSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNFVVRQYSNFLTDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWF-EWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDVDNMASLFHGIFYSIFLQVNRLGEQEAVYKLADSYLNMLCIY--
10SPARKS3nxca0.9770.8942.340threading_10--------RNRREEILQSLALMLE------SITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHA------RLQGRINQLFERIEAQLRQVLREKRMREGGYA-TDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.764 to 2id3A
TM-score=0.734 to native
SCOP code=a.4.1.9		 TM-score=0.764 to 2id3A
TM-score=0.737 to native
SCOP code=a.4.1.9		 TM-score=0.797 to 1vi0A
TM-score=0.781 to native
SCOP code=a.4.1.9		 TM-score=0.749 to 2id3A
TM-score=0.756 to native
SCOP code=a.4.1.9		 TM-score=0.760 to 2id3A
TM-score=0.769 to native
SCOP code=a.4.1.9

  Experimental Structure

Download 3nxcA
SCOP code=a.4.1.9