Template-based Modeling Results for SIXA_ECOLI

Submitted Primary Sequence

>Length 161
MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI
CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI
21000010010223222222220022002102200310322323111000021110120021002102122213112310221111100100221143221000000011100100020022322220220000001024313010100001210311334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI
1	MUSTER	1ujbA	1.000	0.969	3.620	threading_1	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
2	SPARKS	1ujba	1.000	0.969	4.607	threading_2	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
3	PROSPECT2	1ujbA	1.000	0.969	3.082	threading_3	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
4	PPA-I	1ujbA	1.000	0.969	3.777	threading_4	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
5	HHPRED-l	1ujc_A	1.000	0.969	4.110	threading_5	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
6	HHPRED-g	1ujc_A	1.000	0.969	4.020	threading_6	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
7	SP3	1ujba	1.000	0.969	4.461	threading_7	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
8	SAM-T99	1ujbA	1.000	0.969	3.491	threading_8	MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLK-----
9	MUSTER	3f2iF	0.244	0.969	2.723	threading_9	-ELYLIRHGIAEAQGIKDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRARQTAEILLASG-LSCQLEESNHLAPNGNIFNWLDYWLKPKNPENAQIAIVGHEPCLSNWTEILLWGEASLVLKKAGI-GLKLPEIGSPVQFWLTPPRYLLLEH--
10	SPARKS	3f2ia	0.227	0.957	3.519	threading_10	-ELYLIRHGIAEAQ-IKDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRARQTAEILLAS-GLSCQLEESNHLAPNGNIFNWLDYWLKPKNPENAQIAIVGHEPCLSNWTEILLWGEAKDVLKKAGIGLKEIGSPVGRSQFWLTPPRYLLL----

Predicted Tertiary Structure


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TM-score=0.704 to 1h2fA TM-score=0.999 to native SCOP code=c.60.1.1	TM-score=0.704 to 1h2fA TM-score=0.999 to native SCOP code=c.60.1.1	TM-score=0.704 to 1h2fA TM-score=0.999 to native SCOP code=c.60.1.1	TM-score=0.704 to 1h2fA TM-score=0.999 to native SCOP code=c.60.1.1	TM-score=0.704 to 1h2fA TM-score=0.999 to native SCOP code=c.60.1.1

Experimental Structure

Download 1ujbA

SCOP code=c.60.1.1