Template-based Modeling Results for SGRR_ECOLI

Submitted Primary Sequence

>Length 551
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEECCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
55323012101200300223223020310031000033002100300343100001032231330201001202200221022114333032003002232201210012123224423210100012214211101123211010021002000201442110102003313221311010101300201213302030000002102213122101102121311010102211220010001010000133123223122110000000022022310201104211233020110101002211111000112303323333021212300000000042331213100200010010210021022212301110201113133132232333222320100012212213100000130023241202011010221211313000000001021111110000002021022012122212113133111201300220032310000000100020342020020001110003100011445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
1	MUSTER	1uqwA	0.195	0.762	1.995	threading_1	---------------------------------------------------------------------------------------------------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEK--LKNVLAESYTSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAISPAALEKGKEIGFYPVGTGPYELDTWNTDFVKVKKFAGYWQGLPKLDSITWRPVADNNTRIPYEQATLLEKNKNIEL---ASPSIQRYISNVTQKPFDNPKVREALNYAINRPALVKVAFA---GYATPATGVVPAYAQSYKPWPYKEAGYPSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTADAGQRAAEVEGKGQYTGWSASTGEA-DWALSPLFASQNWPKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQSPWIPLVVEKLVSAHSKNLTGFWIPDTG-FSFEDADLQ----
2	SPARKS	3t66a	0.175	0.759	5.476	threading_2	----------------------------------------------------------------------------------------------------------------------EKHIHFLFNVSTNSLDPHVDMTY--IPVRAGITETLVRVDEENVTIAPWLAESWDSTDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESNALKIDEIEA-DGYTLHITTKEPFPEFISELVNPNVSIID---VTEEDFTNHPVGTGPFALESFTPGKLELVRYDEYWDGASKLDSVTFSFNEDASARSLALSIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTI---MLGYAEVADGPFIETGTDIAIQYLEEAGYTLFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMASNRDWYSNVTSPRGDAG-YYLNATYHPTGALPELTGIIDELNRTVDQDVRAKLTEQAAAYIDEKIHSFLIHPSAVVAYDENVKNWVTTRSEYYMINQLDV-----
3	PROSPECT2	1xocA	0.157	0.777	3.499	threading_3	-------------------------------------------------------KPQQG-----------------------------------------------------------GDLVVGSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEK-LNVKLSLAESIKLDGGLAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDTYEMLKSVEKKGDYEVLFKLKYKDGNFYNNALDSTAILPKHILGNVPINRKKPIGSGPFKFKEWKGQYIKLEANDDYFEGRPYLDTVTYKVIPDANAAEAATDYKTAEKFNNLKIVTDLALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQV---LDGDGEVAYIPESPLSWNYPKDIDVPKFEYSFTLKTNQGNKVREDIAVVVQEQLKKIGIEVKTQIVEWSALVPPNWDFDAMVMGWSLSTFPDQYDIFHSSKNAEADKLM--KDAKSISDRKQYSKEYEQIYQKIAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLNIEKWWL---AK
4	PPA-I	1uqwA	0.192	0.764	3.491	threading_4	---------------------------------------------------------------------------------------------------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEK--LKNVLAESYTSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDHNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAISPAALEYGKEIGFYPVGTGPYELDTWNTDFVKVKKFAGYWQGLPKLDSITWRPVADNNTRAAYEQATLLEKNKNIELASPSIQ---RYISNVTQKPFDNPKVREALNYAINRPALVKVAFA---GYATPATGVVPAYAQSYKPWPYDPPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTADAGQRAAEVEGKGQFYTGWSASTGEADWALSPLFASQNWPKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQSPWIPLVVEKLVSAHSKNLTGFWIPDTG-FSFEDADLQ----
5	HHPRED-l	1uqw_A	0.160	0.759	3.519	threading_5	---------------------------------------------------------------------------------------------------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDK-E-KLKNVLAESYTVDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATA-ISPAALYGKEIGFYPVGTGPYELDTWNQTFVKVKKFAGYWQPLPKLDSITWRPVADNNTRAA-LQTGEAQFAFPIEL-ASPSI-QRYIS-NVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTA-DAGQRAAEVSGVR-FYTGWSASTGEADWALSPLYSNKQVDDFLAQALKTNDPAEKTR--LYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWI-PDTGFSFEDADLQ----
6	HHPRED-g	1dpe_A	0.181	0.771	3.060	threading_6	-----------------------------------------------------------------------------------------------------------------------KTLVYCSEGSPEGFNPQLFISGTTYDASSPLYNRLVEFKIGTTEVIPGLAEKWESEDGKTYTFHLRKGVKWHDNKELNADDVVFSFDRQKNAQNPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAEKLDLNPIGTGPFQLQQYQDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIK---AVYQGAGVSAKNLIPPTMPEKAKALLKEAGLEGFSIDLWPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDHQTVMMGWTGDNGDPDNFFATEFSCAASEQGSNLIQPARATDDHNKRVELYKQAQVVMDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE----
7	SP3	3t66a	0.172	0.759	5.592	threading_7	----------------------------------------------------------------------------------------------------------------------EKHIHFLFNVSTNSLDPHVDMTY--IPVRAGITETLVRVDEENVTIAPWLAESWDSTDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESVAIEIDEIEA-DGYTLHITTKEPFPEFISELVNPNVSIIDVTE---EDFTNHPVGTGPFALESFTPSKLELVRYDEYWDGASKLDSVTFSFNEDASARSLALSIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTI---MLGYAEVADGPFIPFAPSIAIQYLEEAGYTLFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMASNRDWYSNVTSPRGDAG-YYLNATYHPTGALPELTGIIDELNRTVDQDVRAKLTEQAAAYIDQKIHSFLIHPSAVVAYDENVKNWVTTRSEYYMINQLDV-----
8	SAM-T99	1dppA	0.181	0.771	3.670	threading_8	-----------------------------------------------------------------------------------------------------------------------KTLVYCSEGSPEGFNPQLFTSGTTYDASSPLYNRLVEFKIGTTEVIPGLAEKWESEDGKTYTFHLRKGVKWHDNRELNADDVVFSFDRQKNAPLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADPEKLDLNPIGTGPFQLQQYKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASECQVMPYPPADIARMKQDLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAV---NKDAIIKAVYQGAGVSAKNLIPPWGYNDDVDYTKEAGLEKGFSIDLWANPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRKGEHQTVMMGWTGDGDPDNFFATLFSCGSNYSKWCYKPFEDLIQPARKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE----
9	MUSTER	3t66A	0.177	0.759	1.993	threading_9	----------------------------------------------------------------------------------------------------------------------EKHIHFLFNVSTNSLDPHVDM--TYIPVRAGITETLVRVDEENVTIAPWLAESWDSTDGQHWTIKLREDVTFQNGKEMDAEAVKASLERALDESNALKIDEIEA-DGYTLHITTKEPFPEFISELVNPNVSIIDV---TEEDFTNHPVGTGPFALESFTGSKLELVRYDEYWDGASKLDSVTFSFNEDASARPEVESIETLQANEGIMVEATETFRTHNLTMNLDRDSLKDVNVRRAVDVLLDRQEIVDTIM---LGYAEVADGPFIETGTDIAIQYLEEAGYTHFTVLTYGSRAELPLIAQVFQSNAKQIGIEVEIRQIEVPEEYMASNRDWYSNVTSPRGDA-GYYLNATYHPTGALPELTGIIDELNRTVDQDVRAKLTEQAAAYIDEKIHSFLIHPSAVVAYDEKVKNWVTTRSEYYMINQLDV-----
10	SPARKS	3rqta	0.140	0.751	5.159	threading_10	----------------------------------------------------------------------------------------------------------------------GKDLNISLPLKTKSIAPYETDVPVKI----GAAESLFKTND-QGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAEKVKSSLENSKKSDLVKYSLPISSIKGQKLTIKTNSAYPELVSELANPFAIYDT---DAKSDVNQTPVGTGPYQIKDYKSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDNNQNLKVSKESGFRTSLLYNHTNK---KTKSVREALDHIIDRQGIADHI---YQGYAKPATSPFNPYIKEPKLTKQAKDGYTKIKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWYSFGTIPRGDTG-YFFNQAYKKDGAISNVDDLINQLNHTVDVKERHNISNDIIKLSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIYRTTIE----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.801 to 1uqwA SCOP code=c.94.1.1	TM-score=0.798 to 1uqwA SCOP code=c.94.1.1	TM-score=0.671 to 1uqwA SCOP code=c.94.1.1	TM-score=0.799 to 1xocA SCOP code=c.94.1.1	TM-score=0.799 to 1uqwA SCOP code=c.94.1.1