Template-based Modeling Results for SGCR_ECOLI

Submitted Primary Sequence

>Length 260
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
CCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCCEECHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
55333221132002102524212032004202102110120032014323100101100102322333322131132121311310011023004311000000000011003102312010000002001100313301000010101222200012101200320100100000100113210111122101011200221310000013131312000000102203000012202320032035120100003335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
1	SPARKS	2w48a	0.121	0.888	1.171	threading_1	--SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQ-GIVT------IAINYDYNENLWLEQQLKQKEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPSRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSELSIEMAKLRQARYSIGIAGEEK--YSGILGALHGRYINCLVTN----RETAELLLK------------
2	PROSPECT2	2w48A	0.115	0.938	1.624	threading_2	---SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIV-----------TIAINYDYNENLWLEQQLKQKQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLMQSQHFKTISSYWDLDVALVGIGSPAIRDGANWHAFYGSEESDDLNA--RHVAGDIGLVDTNMSEKTLSIEMAKARYSIMGEEKYSGILGALHGRYINCLVTNREK
3	PPA-I	1m0sA	0.132	0.612	1.403	threading_3	----------------------------------------------------------------------------MNQLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALKDKIQGAVAASKESEELLRKQ--------GIEVFNANDV------------SSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPL-----PVEVIPMARSQVGRKLAALGGSPEYREGVV
4	SAM-T99	1i1gA1	0.157	0.196	1.144	threading_4	----IDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEK-GIIE-----------GYT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	3rrl_B	0.144	0.642	3.679	threading_5	----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVSG-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFEFSDQVKEKTEAEFEVRL---
6	SPARKS	1vb5a	0.177	0.846	1.037	threading_6	----LPERVLEILREMKREAKKGAEAFLTLAELDESLLEDAIMELREE---VVKVNPSMALARFIPVTNRRALEFLRRMEEAKRELASIGAQLIDDGDVIITSFSSTVLEIIRTARKKRFKVILEGLHLARELEFS-GIEFEVI------------TDAQMGLFCR-EASIAIVGADMITKDGYVVNKA-GTYLLALACHENAIPFYVAAETYKFHPTLLFDVTPWKYVRGIITELGIPRDI------------------
7	HHPRED-g	3rrl_B	0.145	0.635	3.310	threading_7	----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVSG-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVSLDQVKEKTEAEFEVRL-----
8	PROSPECT2	1j5ya	0.120	0.638	1.392	threading_8	-KTVRQERLKSIVRILERKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLAGGKSGVS-----RLVAVKHAPEEIKEELLCVVRNGGRIVD------------------------------------VIVEHPVYGEIRGIIDVSSEEEVLKFVN-------------LEAKTEPLLTLSGG-------------VHLH--------------------TIEAPDEET-ERIRELKKKGFLI-----EE
9	SP3	1ks2a1	0.156	0.519	1.080	threading_9	-----------------------------------------------------------------------------TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTQIEGAVSSSDASTEKLKSL--------GIHVFD-------------LNEVSLGIYVDGADEINGH--QIKGGGAALTREKIIASVAEKFICIADASKQ-------------VDIL-ANRGAD-----------VALIGTPDGV
10	MUSTER	2w48B	0.127	0.877	0.746	threading_10	-NSDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQ-GILKQKFG-AVVASSDGLL----------EEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDHAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSELSIEMAKLRQARYSIGIA-MGEEKYSGILGALHGRYINCLVTN----RETAELLLK------------

Predicted Tertiary Structure


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TM-score=0.600 to 2gnpA SCOP code=c.124.1.8	TM-score=0.631 to 2gnpA SCOP code=c.124.1.8	TM-score=0.650 to 1m0sA SCOP code=c.124.1.4	TM-score=0.560 to 1i1gA SCOP code=a.4.5.32	TM-score=0.640 to 2nrcB SCOP code=c.124.1.3