Template-based Modeling Results for SGCQ_ECOLI

Submitted Primary Sequence

>Length 268
MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHIRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHIRR
CCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEECEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCEEEEEHHEEECCEECCCCCHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHIRR
4221221122330000000030021112132311031002201210100230101000011212112224132200000020011002204000000001110000000000102001100000000121112110110020034020220100000133112111322021002000321111000000221225222110220131043000000000023002200210100000000122220212013210220132024235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHIRR
1	MUSTER	1tjpA	0.170	0.877	1.219	threading_1	MERYENLFAREGAFVPFVTL----GDPG----------IEQSLKIIDTLIDAGADALELGVPFSDPLADGVT---PAQCFEMLALIREKHTIPIGLLMYANLDAFYARCEQVGVD-------SVLVADVPVEE--SAPFRQAALRHN---IAPIFIC----PPNADDDLLRQVASYGGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISPEQVSAAVRAAAGAISGSAIVKKNLASPKQMLAELRSFVSAMKAASR
2	SPARKS	1rd5a	0.157	0.877	2.291	threading_2	SRPVSDTMAGKTAFIPYIT----AGDPD----------LATTAEALRLLDGCGADVIEL----GVPCSDPYGPIIQASVARAMDAVLEMLSCPVVLLSYYKPIMFRSLAKMKEA-----GVHGLIVPDLPYVA-----AHSLWSEAKNNNLELVLLT----TPAIPEDRMKEITKASGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGIKPEHVKQIAQWADGVIIGSAMVRQ-LGEAASPKQGLRRLEEYARGMKN
3	PROSPECT2	1rd5A	0.157	0.881	1.716	threading_3	SRPVSDTMKGKTAFIPYITA----GDPD----------LATTAEALRLLDGCGADVIELGVPCSDPYIDGASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAG-------VHGLIVPDLPYVAAHSLWSEAKNNNLELVLLT-----------TPAIPEDRMKEITKASEGFVYLVSGPRANVNPRVESLIQEVKKVTNKPVAVGFGIKPEHVKQIAQWADGVIIGSAMVRQLGEAASPKQRRLEEYARGMKNALG
4	PPA-I	1tjpA	0.139	0.910	1.771	threading_4	MERYENLFAREGAFVPFVT----LGDPG----------IEQSLKIIDTLIDAGADALELGVPFSDPLADGAGVTPAQCFEMLALIREKHPTIPIGLLMYANLVFNNGIDAFY-ARCEQVGVDSVLVADVPVEE--SAPFRQAALRHNIAPIFICP-------PNADDDLLRQVASYGGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISPEQVSAAVRAAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAMKA
5	HHPRED-l	1qop_A	0.153	0.877	4.183	threading_5	MERYENLFRREGAFVPFV----TLGDPG----------IEQSLKIIDTLIDAGADALELG----VPFSDPLGPTIQNANLRAFAIIREKPTIPIGLLMYANLVFNNGIDAFYAR-CEQVG-------VDSVLVADVPESAPFRQAALRHNIAPIFIC----PPNADDDLLRQVASYRGYTYLLSRSGVTGAENRG--PLHHLIEKLKEYHAAPALQGFGISPEQVSAAVRGAAGAISGSAIVKIIEASPKQMLAELRSFVSAMKAAS-
6	HHPRED-g	1qop_A	0.152	0.933	4.077	threading_6	MERYENLFRREGAFVPFV----TLGDPGIEQSLKIIDTLIDAGADALELSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIRE--KHPTIPIGLLMYANLVFNNGIDAFYA-RCEQVGVDSVLVADVPVEESA--PFRQAALRHNIAPIFICP-------PNADDDLLRQVASGRGYTYLLSRSGVTGAENRG--PLHHLIEKLKEYHAAPALQGFGISPEQVSAAVRAAAGAISGSAIVKIIEKNLASMLAELRSFVSAMKAASR
7	SP3	3thaa	0.135	0.858	2.671	threading_7	-AVDFRKFYKENANVAYTV----LGYPN----------LQTSEAFLQRLDQSPIDILEL----GVAYSDPIGEIIADAAKIALDQIHSVFELKALVFVYYNLIFSYGLEKFV-KKAKSLGICALIVPELSFEE--SDDLIKECERYNIALITLVS-------VTTPKERVKKLVKHAKFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGINNQDVKR-RKVADGVIVGTSIVKCFKQGNLDIIKDIEEIF--------
8	SAM-T99	3thaA	0.102	0.840	0.984	threading_8	AVDFRKFYKENANAYTVLGYPNLQTSEAFLQ----------------RLDQSPIDILELGVAYSDPIADEIIAD------------AAKIALDQGVDIHSVFELLARIKTKKALVFVYYNLIFSYGLEKFVKKAKSLGICALIKECERYNIALITLVSVTTPKE---KKLVKHAKGFIYLL-ASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRRKVADGVIVGTSIVKCFKQGN----------LDIIKDIEE
9	MUSTER	2ekcB	0.162	0.873	1.199	threading_9	-GRISDKFTREKALVSYLMV----GYPD----------YETSLKAFKEVLKNGTDILEIGFPFSDPVADGIR---FEDVLELSETLRKEFDIPFLLMTYYNPIFRIGLEKFC-RLSREKGIDGFIVPDLPPEE--AEELKAVMKKYVLSFVPLGA-------PTSTRKRIKLICEAA---DEMTYFVSVGAREKLPYEIKKKVEEYRELCDKPVVVGFGVKKEHAREIGSFADGVVVGSALVK---LAGQKKIEDLGNLVKELKEGRE
10	SPARKS	3thaa	0.135	0.858	2.166	threading_10	-AVDFRKFYKENANVAYTV----LGYPN----------LQTSEAFLQRLDQSPIDILEL----GVAYSDPIGEIIADAAKIALDQIHSVFELKALVFVYYNLIFSYGLEKFVK-KAKSLGICALIVPELSFEE--SDDLIKECERYNIALITLVS-------VTTPKERVKKLVKHAGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGINNQDVKR-RKVADGVIVGTSIVKCFKQGNLDIIKDIEEIF--------

Predicted Tertiary Structure


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TM-score=0.865 to 1tjpA SCOP code=c.1.2.4	TM-score=0.903 to 1tjpA SCOP code=c.1.2.4	TM-score=0.869 to 1rd5A SCOP code=c.1.2.4	TM-score=0.871 to 1rd5A SCOP code=c.1.2.4	TM-score=0.893 to 1tjpA SCOP code=c.1.2.4