Template-based Modeling Results for SFMH_ECOLI

Submitted Primary Sequence

>Length 327
MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
CHHHHHHHHCHHHHCEEECCCCCCCEEEEECCCEECCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEEECCCEECCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCEECCCCEEEEECCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHCCCCCEEEEEECCCCCEECCCCCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
311001011110101000112200210101011002222232011010113112000101022222222001010030123412321200201110000010011112120012212320022202322210112121102010010023202012100000000222232222200100010201013302024111010101200021022212124222112121201020232222010101010121113011121310000001333220212222110112132222120101000012223312412020101020124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
1	MUSTER	1klfP	0.158	0.810	1.213	threading_1	--------------FACKTANGGGGSANVYVN---LAPVVNVGQNLVVDLSTQ-----IFCHNDYPETTDYVTLQRGSAYGGVLSN-----------FSGTVKYSGSSYPFPTTSETPRVV-YNSRTDKPW-----PVALYLTPVSSAGGVAIKAGSLIAVLILRQNYNSDDFQFVWNIYANNDVVVPGGCDVSARD-VTVTLPDYP-------GSVP---------IPLTVYCAKSQ-NLGYYLSGTTADAGNSIFTNPAQGVGVQLTR-NGTIIPANNTVSLGAV---GTSAVSLGLTANYAR-TGGQVTAGNVQSIIGVTFVYQ
2	PROSPECT2	3k6sA2	0.100	0.979	1.433	threading_2	FNLKITAANQTGGLYQCGYSTG--ACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLAHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVRQWRMKAEVTGTQIGSYFGASLCSVDVDSLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEE-----ENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT
3	SPARKS	3jwne	0.185	0.446	2.609	threading_3	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITIRGYVR-DNGCSVAAESTFTVDLMENAAKQFNNIGATTPV-----VPFRILLPCGNAVSAVKVGFTGVADSHNANLLALEAAGLGIQLLNEQQNQIPLNAPSSALSWTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
4	PROSPECT2	3k4zA	0.079	0.813	1.423	threading_4	ML---------------EDNSSTLPPYKNDLLYERTFDEGLCYPWHTCEDSGGKCSFDVVDVPGQPGNKAFAVTVLDKGQNRWSVQMRHRGLGHTYRVRLKIWADASCKVYIKIGQMGEPYAEYWNNKWSPYTLTAGKVLEIDETFVMDK----PTDDTCEFTFHLGGELAATPPYTVYLDDVSLYDPEY-----------------------TKPVEYILPQPDVRVNQVGYLPEGKKVATVVC-------------NSTQPVKWQLKNAAGVVVEPKGLDYVHWLDFSDFATEGIGYYFELPTVNSPTNYSHPF------DIRKD
5	PPA-I	3bfwA	0.145	0.401	1.607	threading_5	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKPCTVSTTN-ATVDLGDLYSFSLMSAGAASAW-----HDVALELTCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQ--VDDSSQSAHFPLQVRALTVNG-GATQGTIQAVISITYTYS
6	HHPRED-g	3jwn_H	0.137	0.826	3.089	threading_6	-------FACKTANGTAIPIGGGSANVYVNLAPAV-----NVGQNLVVDL---STQIFCHNDYPETI-TDYVTLQR-----GSAYGG---VLSS-FS--GTVKYNGSSYPFPTTSETPRVVY----NSRT-DK-PWPVALYLTPVSS-AGGVAIKAGLIAVLILRNNYNSDDFQFVWNIYANDVVVPTGGCDVS-ARDVTVTLPDYPGS-----------VPI-----PLTVYCAKS-QNLGYYLSGTTADAGNSIFTNPAQGVGVQLT-RNGTIIPANNTVSLGAVG---TSAVSLGLTANYART-GGQVTAGNVQSIIGVTFVYQ
7	HHPRED-l	2w07_B	0.197	0.358	4.379	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSRG---E-----VTKTISISCPY--GSLWIKVTGNTMGGQNNVLATNITHFGIALYQGKGTPLTL---------------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIY-
8	PROSPECT2	3kptA	0.088	0.899	1.421	threading_8	------------------------KRGAVDL-IKTGVNEKAAGAVFSLFKKDGTEVKKELATDANEYGEYYFQETKAPKGYVIDPTKREFFVKNSGTINEDGTITSGTVVKEVKNNEEPTIDKKINGKLEALPINPLTNYNYDIKTLIPEDIKEYKKYVVTDIVKIDGAEVNANVVEVAIEGQKVTATVKDFTKDGKKEFHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIIELTKIDSAN----KNKKGAEFVLKDNNGKIVVVAGKEVTGV----SDENGVIKWSNIKTSYQLLKISENNQTVKLTIENNKS
9	HHPRED-g	2w07_B	0.195	0.361	4.001	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSRG--------EVTKTISISCPY--GSLWIKVTGNTMGGQNNVLATNITHFGIALYQGKGTPLTL---------------RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
10	SP3	3jwne	0.185	0.446	2.527	threading_10	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITIRGYVR-DNGCSVAAESTFTVDLMENAAKQFNNIGATTPV-----VPFRILLSCGNAVSAVKVGFTGVADSHNANLLALEAAGLGIQLLNEQQNQIPLNAPSSALSWTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.832 to 1klfP SCOP code=b.2.3.2	TM-score=0.810 to 1klfP SCOP code=b.2.3.2	TM-score=0.650 to 1sq9A SCOP code=b.69.4.1	TM-score=0.550 to 1klfP SCOP code=b.2.3.2	TM-score=0.599 to 1guiA SCOP code=b.18.1.14