Template-based Modeling Results for SELB_ECOLI

Submitted Primary Sequence

>Length 614
MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK
CEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECCCEEEEECCCCCEEEEEEEECCCCHHHCCCCCEEEEECCCCCCHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEECHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK
21100001011000000100111202303212422010000000022232200000100001200000000000010000000023222110320010022021210000001012123210320131023005312123020000002213002001300230123322233102010110000311000000001201021222010012342020100101222132021011000001130333203201000132113102201000101121232210000000020101000133200000022101013211000121222000100100211135323332300210111242321220010023312130210111221213002210333110111200001200220042003001210431322310213201210132233200110021024222020221001023131212330220022004102321220320033021333102200210142120010122100123102200300230044222000110232120112001200100141100122141000132222355
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK
1	SPARKS	3agpa	0.234	0.963	5.920	threading_1	VNVGTIGHVDHGKTTLTAAITTVLAKTYG---------GTSHVEYD-TPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKKILELAGFLDSIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETSTCTGVEMFRKLLDEGRAGENVGVLLRG-IKREEIERGQVLAKPGTIKPHTKFESEVYRHTPFFKGYRPQFYFRTTDVTGTIELPEGVKMVVTLIHPIAMDDGLRFAIRE--GGRTVGAGVVAKVLSGASSRNS--LSAQLRRAANTRILSIANDLLLAYGQSPFNSEAECISFSDDFRINYLKAEIMSKYDDFSLGIDTEAVAWEKFLAAEAECALTNARLYRPDIHMARRKIAKLIGDVPVEGMLRHCRFSGGATTTNNRSYGHALPQACTPRALKYVLALRASTHFDPGWLRDRLRCWGIDQTINQRRAHEGSVTNNLATVASDLLLPPGWFEVLMDLRPKGRLPDGSVVARSVCEILDLDSCAVPALREVFKYVGFT--------TNTKKTFSEG
2	PROSPECT2	1d2ea	0.284	0.567	2.704	threading_2	VNVGTIGHVDHGKTTLTAAITKIEIDNAPEERARGITINAAHVEYS-TAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVEHVVVYVNKADAVQSEMVELVELEIRELLTEFGYKGEETPIIVELGLKSVQKLLDAVDTIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLGHSKNIRVTGIEMFHKSLDRAEAGDNLGALVRG-LKREDLRRGLVMAKPGSIQPHQKVEAQVYIHKPFVSHFMPVMFSLTWDMACRIILPPGKKLTLILRQPMILEKGQRFTLRD--GNRTIGTGLVTDTPAMT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEDKN-------------------------------------IKW
3	HHPRED-l	3agp_A	0.245	0.891	3.474	threading_3	VNVGTIGHVDHGKTTLTAAITTV----------------TSHVEYDTPT-RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDEELLELVEMEVRELLSQYDFDDTPIVRGSALKALEILELAGFLDSYPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKQKSTCTGVEMFRKLLDEGRAGENVGVLLRG-IKREEIERGQVLAKPGTIKPHTKFESEVYIHTPFFKGYRPQFYFRTTDVTGTIELPENIKMVVTLIHPIAMDDGLRFAIREGG--RTVGAGVVAKVLSGAS-------------------SRNSLSAQLNTRLSIANDLLLAYGQSPFNSEECISFS-----PRFDGTPDDINYLKA-------EIMSKYDDSLGIDTEAVA-----------WEKFLAAEAE---CALTNARLYRPDEDFNFSLGEHMARRKIAKLIGDVPSVSFKFALPQACTPRALKYVLALRASTHFDIRISDDRCIAPGWFQLGIGILRDRLRCW-GIDLNQRRAHESISLALCELWFEVLMDLRSPKGDGSVVTYEISSMGNG-
4	PPA-I	2elfA	0.208	0.518	3.758	threading_4	ANVAIIGTEKSGRTSLAANLG-----------KKGTSSDITYN---NDKEGRNVFVDAHSYPKTLKSLITALNISDIAVLCIPP-QGLDAHTGECIIALDLLGFKHGIIALTRSDSTH-HAIDELKAKLKVITSGTVLQDWECISLNTNKSEGVDELKARINEVAENAELNSLPARIFIDHAFNV---TCVVLGVVKQGISKDKDKTKIFPLDRDIEIRSIQSHDVDIDSAPAGTRVGRL--KNVQAKDIERGFIISDKEIVTTDYTLECTVSKFTKIEPASVLHLFVGLQSEPVRVEKISTCVLELSGNKKLAYSKQDRFLLANLDLTQRFAAYGFSK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-g	3agp_A	0.230	0.901	3.101	threading_5	VNVGTIGHVDHGKTTLTAAITTV----------------TSHVEYDTPT-RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDEELLELVEMEVRELLSQYDFDDTPIVRGSALKAAKILELAGFLDSYIPPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKQKSTCTGVEMFRKLLDEGRAGENVGVLLRG-IKREEIERGQVLAKPGTIKPHTKFESEVYIHTPFFKGYRPQFYFRTTDVTGTIELPEGIKMVVTLIHPIAMDDGLRFAIREGG--RTVGAGVVAKVLSGAS-------------------SRNSLSAQLNTRLSIANDLLLAYGQSPFNSEAECISF----SPRFDGTPDDFR--INYLKAEIMSKYDDFSL--GIDT-----------EAVAWEKFLAAEAECAL-TNARLYRPDYSEDFNFSLGESCIHMAIAKLIGDVPS-VEGMLRHCRFSPRALKYVLALRARISDAVTVPKDRCIAIEPWLGIGGILRDRLRCWGDQTINQRRAHEGISLALCELLFEVLMDLRSPKGLPDGSVVTY-EKISSM
6	SP3	1d2ea	0.284	0.567	5.586	threading_6	VNVGTIGHVDHGKTTLTAAITKIEIDNAPEERARGITINAAHVEYS-TAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVEHVVVYVNKADAVDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCSVQKLLDAVDTIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLGHSKRTVVTGIEMFHKSLDRAEAGDNLGALVRG-LKREDLRRGLVMAKPGSIQPHQKVEAQVYRHKPFVSHFMPVMFSLTWDMACRIILPPGKKLTLILRQPMILEKGQRFTLRD--GNRTIGTGLVTDTPAMTEEDKNIKW----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SAM-T99	1eftA	0.288	0.542	3.980	threading_7	VNVGTIGHVDHGKTTLTAALTFVDIDKAPEERARGITINTAHVEYETAK-RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDPELLDLVEMEVRDLLYEFPGDEVPVIRGSALWVDKIWELLDAIDEYIPPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLARKTVVTGVEMHRKTLQEGIAGDNVGLLLRG-VSREEVERGQVLAKPGSITPHTKFEASVYVLTGFFSGYRPQFYFRTTDVTGVVMPGDNVTFTVELIKPVALEEGLRFAIREGG--RTVGAGVV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SPARKS	3avta	0.228	0.977	5.914	threading_8	VNVGTIGHVDHGKTTLTAAITTVLAKT--------YGGNTSHVEYD-TPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKKILELAGFLDSIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETSTCTGVEMFRKLLDEGRAGENVGVLLRG-IKREEIERGQVLAKPGTIKPHTKFESEVYRHTPFFKGYRPQFYFRTTDVTGTIELPEGVKMVVTLIHPIAMDDGLRFAIRE--GGRTVGAGVVAKVLSGASSR--NSLSAQLRRAANTRILSIANDLLLAYGQSPFNSEAECISFSDDFRINYLKAEIMSKYDDFSLGIDTEAVAWEKFLAAEAECALTNSEDFNFSIHMARRKIAKLIGDVPVEGMLRHCRFSGGATTTNNRSYGHALPQACTPRALKYVLALRASTHFDPGWLRDRLRCWGIDQTINQRRAHEGSVTNNLATVASDLLLPPGWFEVLMDLRPKGRLPDGSVVARSVCEILDLDSCAVPALREVFKYVGFFRESCGKHYYSGVDVTPFY
9	MUSTER	2elfA	0.208	0.518	2.089	threading_9	ANVAIIGTEKSGRTSLAANLG-----------KKGTSSDITYNND---KEGRNVFVDAHSYPKTLKSLITALNISDIAVLCIPP-QGLDAHTGECIIALDLLGFKHGIIALTRSDSTH-HAIDELKAKLKVITSGTVLQDWECISLNTNKFEGVDELKARINEVAENAELNSLPARIFIDHAFNV---TCVVLGVVKQGISKDKDKTKIFPLDRDIEIRSIQSHDVDIDSAPAGTRVGRL-KN-VQAKDIERGFIISDKEIVTTDYTLECTVSKFTKIEPASVLHLFVGLQSEPVRVEKISTCVLELSGNKKLAYSKQDRFLLANLDLTQRFAAYGFSK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	PROSPECT2	3agpA	0.222	0.930	2.654	threading_10	VNVGTIGHVDHGKTTLTAAITTV-------LAKTYGG--TSHVEYD-TPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKAILELAGFLDSIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKCTGVEMFRKLLDEGRAGENVGVLLRG-IKREEIERGQVLAKPGTIKPHTKFESEVYIHTPFFKGYRPQFYFRTTDVTGTIELPEGVKMVVTLIHPIAMDDGLRFAIRE--GGRTVGAGVVAKVLSGASSRNSLSAQLRRAANTRIEVLSIANDLLLAYGQSPFNSEAECISFS--------PRFD---------GTPDDFRINYLKAEIMSKY---DDFSLGIDTEAVAW-------EKFLAAEAECALTNARLYRPDY---SEDFNFSLGESCIHMARRKIAKLIGDVPSVEGMLRHCRFSPRALKYVLALRASTHFAVTVPKNIAIEPGWNMFFQLGIGGILRDLNDQTINQRRAHEAASDSISLALCELLDLRSPKGRLPDGSVVTYEKISSMD

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.621 to 1d2eA SCOP code=b.43.3.1	TM-score=0.550 to 1d2eA SCOP code=b.43.3.1	TM-score=0.611 to 1skqA SCOP code=b.43.3.1	TM-score=0.613 to 2pmdA SCOP code=b.43.3.1	TM-score=0.611 to 1d2eA SCOP code=b.43.3.1