Template-based Modeling Results for SECF_ECOLI

Submitted Primary Sequence

>Length 323
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP
55432223212222310201310100000000000000000003002100002100001010233131310220034122332201212322101010222323211310011012003312332020221110012002200210000000000000000000011100000000000000000000001212011100000000000103220000210121034233220220011001200210011000000000000000021020000000000000000000000000120112333223332333223233225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP
1	MUSTER	3aqpA2	0.353	0.913	1.772	threading_1	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLS-----DERRLELERLFASELK--ATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
2	SPARKS	3aqpa	0.353	0.913	7.752	threading_2	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLS-----DERRLELERLFASELK--ATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
3	PROSPECT2	3aqpA2	0.359	0.913	4.287	threading_3	LRAGKKLRQAILVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLSDERRLELERLFASE-------LKATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
4	PPA-I	3aqpA2	0.349	0.913	3.695	threading_4	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLS-----DERRLELERLFASELKAT--VLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
5	HHPRED-l	3aqp_A	0.362	0.907	9.950	threading_5	LADRGEIPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGAVITQV--YREFLVKLPPLSDER-----RLELERLFASEL--KATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
6	HHPRED-g	3aqp_A	0.368	0.892	9.314	threading_6	EIRP----PMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGAVITQ---YREFLVKLPPLSDERRLE-L----ERLFAS--ELKATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
7	SP3	3aqpa	0.353	0.913	7.336	threading_7	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLS-------DERRLELERLFASELKATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
8	SAM-T99	3aqpA2	0.356	0.913	7.807	threading_8	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLSDERRLELERLFASEL-------KATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
9	MUSTER	3aqpA	0.353	0.913	1.291	threading_9	ADRGEIRPPMWLVDPRFNFMGPARYVTAATLLLAALAAGVVFAKGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFPGKEAVITQVYREFLVKLPPLS-----DERRLELERLFASELK--ATVLASETVGPAIGEELRRNAVMAVLVGLGLILLYVAFRFDWTFGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKNR---------------------
10	SPARKS	2rrna	0.279	0.266	1.450	threading_10	------------------------------------------MVGFNYSIDFTGGTAYTLRAEPNVEVETLRRFLEEKGFKEAVITQVQAPTEFLVKLPPLS-----DERRLELERLFASELK--ATVLASETVG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.438 to 1ybaA SCOP code=c.2.1.4	TM-score=0.438 to 1ybaA SCOP code=c.2.1.4	TM-score=0.438 to 1ybaA SCOP code=c.2.1.4	TM-score=0.434 to 1kd9A SCOP code=h.1.3.1	TM-score=0.436 to 1kd9A SCOP code=h.1.3.1