Template-based Modeling Results for SDAC_ECOLI

Submitted Primary Sequence

>Length 429
METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS
CCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS
553332232224324221111011000000000010001101120122000000000010010000002000000001433243003001210111002000000000111101011000011011100220212201100000000000000120122000100111000000000000111012010100210223222220200000000000000001100100000012124312320131012000000000000000000000010102201202422020000012213120010000000000001000010000120011001200323243232320110000000000000011111010002100010000000000000022021033111300000000000000001012114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS
1	MUSTER	3gi9C	0.133	0.909	1.290	threading_1	ME-------LKNKKLSLWE-----AVSMAVGVMIGASIFSIFVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDNITGALSILLWMSY--VISIALFA--KGFAGYFLPLIAPINFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV-------IPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIEN-----PKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKD-LPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVG-----GRKEIVIFSFIVVLGVFLLLLYYQWI
2	SPARKS	3ob6a	0.127	0.897	1.975	threading_2	------------ADAHKVGL--IPVTLMVSGNIMGSGVFLLPANASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLG----TFGAIQSTLNVTLWSFESASVA-----------AGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAMIPNAALRVSA----SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADGLFPPIFARVNKAGVAGLIIVGILMTIFQLSSISPGLVSSVSVIFVPYLYTCAALLLLG--HGHFGKAR----PAYLAVTTIAFLYCIWAVVGSGA
3	PROSPECT2	1jdha	0.079	1.000	1.946	threading_3	AVVNLIRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRESGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGDAATKQEGMEGLLGTLVVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLPANHAPLRGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILVIRGLNPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLGVATYAAAVLFRMS
4	PPA-I	3gi9C	0.125	0.916	2.341	threading_4	-------MELKNKKLSLWE-----AVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDNIITGALSILLWMSYVISIAL---FAKGFAGYFLPLIAPINTNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV-------IPDLAPSAVSGMIFASAIFFLSYMGFGVITNAS-----EHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVG-----GRKEIVIFSFIVVLGVFLLLLYYQWI
5	HHPRED-l	3gia_A	0.120	0.895	4.652	threading_5	------------LK----NKKLSLWVSMAVGVMIGASIFSIFGIAGRNLPETFILSGIY----ALLVAYSYTKLG--AKIVSAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI-NAPI-NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIP------DL-APSAVSGMIFASAIFFLSYMGFGVITNASEHI-----ENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGLPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSA----VFMVIYLFVILSHYILID-EVGGRKEIVIFSFIVVLGVFLLLLYYQW-
6	HHPRED-g	3gia_A	0.109	0.900	4.962	threading_6	--L----------KNKKLSLWEA-VSM-AVGVMIGASIFSIFVIAGRNLPETFILSGIY----ALLVAYSYTKLGA--KIVSAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLI-NAPI-NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIP------DL-APSAVSGMIFASAIFFLSYMGFGVITNASEHIE-----NPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGEEFFER-KVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFM----VIYLFVILSHYILID-EVGGRKEIVIFSFIVVLGVFLLLLYYQWI
7	SP3	3ob6a	0.138	0.914	1.828	threading_7	------------ADAHKVGL--IPVTLMVSGNIMGSGVFLLPANASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFF-PILK-DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLG----TFGAIQSTLNVTLWSFI---GVESASV-----AAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAMIPNAALRVSA----SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADPIFARVNKAGTP--VAGLIIVGILMTIFQLSSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKRPAYGSGAKEVMWSFVTLMVITAMYALNY
8	SAM-T99	1or7A1	0.233	0.240	0.753	threading_8	-------------------------------------VLVERVQKGDQKAFNLLVVRYQHKVASLVSRY----------VPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAV---NTAKNYLVAQGRRPPS------------------------------------------------------------------------------------------------------------------------------------------SDVDAIEAEN----------------------------------------------------------------------------------------FESGGA--------------------------------------------------
9	MUSTER	3l1lA	0.132	0.886	1.245	threading_9	--------------AHKVGLIP--VTLMVSGAIMGSGVFLLP--ASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSY-AYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPI-LK-DPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA---------------AIQSTLNVTLWSFIGVESASVAA-----GVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRV---SA-SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSS-ISPNATKEFGVSSVSVIFTLVPYLYTC-LLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVG
10	SPARKS	3gi8c	0.128	0.895	1.916	threading_10	MELKNKKLSL------------WEAVSMAVGVMIGASIFSIFKIAGRN----LPETFILSGIYALLVAYSYTKLGAKIVSNAGPI-AFIHKAIGDNIITGALSILLWMS---YVISIALFAKGFAGYFLPLINAPINNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIHP---SYVIPDLAPSAVSGMIFASAI----FFLSYMGFGVITNASEHIE-----NPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKEFFERKVWFKSTEGLYITSALGVLFALLF------NMEGVASI--TSAVFMVIYLFVILSHYIL--IDEVGGRKEIVIFSFIVVLGVFLLLLYYQW

Predicted Tertiary Structure


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TM-score=0.695 to 2q6hA SCOP code=f.54.1.1	TM-score=0.700 to 2q6hA SCOP code=f.54.1.1	TM-score=0.688 to 2q6hA SCOP code=f.54.1.1	TM-score=0.583 to 1wa5B SCOP code=a.118.1.1	TM-score=0.699 to 2q6hA SCOP code=f.54.1.1