Template-based Modeling Results for SBCD_ECOLI

Submitted Primary Sequence

>Length 400
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCEEECCCCCCCEEECCCCCEEECCCCEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
1100000011003212222222112100220021023230100000010122211222012101200110131101000000222012112202101111111000112322110212222200000001112232122132223123212200200120022101100323223310000000001111232312221210111101131023000000000130100232320100100100113323422000001124332120120202221200102021210121022033123322110001022332233012102201421101001122333332211122233322312122101221242323321132023002201321233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
1	MUSTER	3auzA	0.168	0.757	1.774	threading_1	MMFVHIADNHLGYRQYNLDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD-----GKDVINVNGEEIFICGTYYHKKSK-----------------REEMLDKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYE----------LEHFDLPKFSYYALGHIHKRILERNDGILAYSGSTEIIYRNEYEEGKGFYLVDFSGNDISDIEKIDIEC-REFVEVNIKKKSFNEAVNKIERC--KNKPVVFGKIKRE--FKPWFDTLKDKI--LINKAIIVDDEFIDMPD-----------------------------------------------------
2	SPARKS	3thna	0.242	0.765	5.297	threading_2	MKILHTSDWHLGVTSWTVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSNNPSVVALHDLLDYLKRMMR-TAPVVVLPGNQDWKGLKLFGNFVTSISSDITF-VMSFEPVDVEAKRGQ-KVRILPFPYPDESEALRKNEGD------------FRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLA-GYAGREIIINRAL-----IPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASPLKTLYYKKID----TSALKSIRDSCRNFPGYVRVVY-EEDSLPDLMGEIDN--------LVKIER------------------------------------------------------------
3	PROSPECT2	3auzA	0.181	0.760	3.227	threading_3	MMFVHIADNHLGYRQYNLDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD-----GKDVINVNGEEIFICGTYYHKK-----------------SKREEMLDKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYE----------LEHFDLPKFSYYALGHIHKRILERFNDILAYSGSTEIIYRNEYEEGKGFYLVDFSGNDLDIIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIK-------REFKPWFDTLKDKILINKAIIVDDEFI----------------------------------------------------DMPD
4	PPA-I	3auzA	0.191	0.760	2.191	threading_4	MMFVHIADNHLGYRQYNLDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD-----GKDVINVNGEEIFICGTYYHKKSK-----------------REEMLDKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYELEHFD----------LPKFSYYALGHIHKRILERNDGILAYSGSTEIIYRNEYEEGKGFYLVDFSGNDLSDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKI------LINKAIIVDDEFIDMPD-----------------------------------------------------
5	HHPRED-l	3tho_B	0.234	0.865	5.338	threading_5	MKILHTSDWHLGVTSWPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSNNPSVVALHDLLDYLKRMMR-TAPVVVLPGNQDWKG-LKLFGNFVTSSDITFVMSFEPVD--VEAK-RGQKVRILPFPYPDES----KN--------EGDFRFFLESR----LNKLYEEALKKEDFAIFMGHFTVEGLA-------EIII-----NRALIPVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASP-LPLKTLKK-IDT--SALKSIRDSCRNFPGYVRVVYEEDSILPDLMGEIDNL-----V---KIERKSRRRESEEFKEELDKLDYFELFKEYLKKREEN------HEKLLKILDELLDEVKKS---
6	HHPRED-g	3tho_B	0.232	0.863	6.054	threading_6	MKILHTSDWHLGVTSWPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSNNPSVVALHDLLDYLKRMMR-TAPVVVLPGNQDWKG-LKLFGNFVTSSDITFVMSFEPVD--VEAK-RGQKVRILPFPYPDES----KN--------EGDFRFFLESRLNKLYEEALK----KEDFAIFMGHFTVEGLA-------EIII-----NRALIPSVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASP-LPLKTLKK-IDTALKSIR---DSCRNFPGYVRVVYEEDSILPDLMGEIDNL----VKI----ERKSRRESPEEFKEELDKLDYFELFKEYLKKREEN--HEKLLKILDELLDE----VKKS---
7	SP3	3thna	0.235	0.767	5.327	threading_7	MKILHTSDWHLGVTSWTSDRREELKKALDKVVEEAEKREVDLILLTGDLLHRNNPSVVALHDLLDYLKRMMR-TAPVVVLPGNQDWKGLKLFGNFVTSISSDITF---VMSFEPVDVEAKRQKVRILPFPYPDESEALRKNEGD------------FRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLA-GYAGREIIINRAL-----IPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASP-LPLKTLYY-KKIDTSALKSIRDSCRNFPGYVRVVY-EEDSLPDLMGEIDN--------LVKIER------------------------------------------------------------
8	SAM-T99	1s8eA	0.180	0.750	4.447	threading_8	MKFAHLADIHLGYEQFHKPREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTQRGPSVLNLLEDFGVYVIGMRKEKVENYLVKGVYKDLEIHGMKYM-------------------------SSAWFEANKEILKRLFRPTDNAILMLHQGVREVARGEDYFEI--------GLGDLPGYLYYALGHIHKRYETSSGSPVVYPGSLERWDFGDYGVNKGFYIVEDFKPRFVEIKVRPFID----VKIKGSEEEIRKAIKRL-IPLIPKNAYVRLNIGWRKPFD-----LTEIKELLNVEYLKIDTWRI---------------------------------------------------------
9	MUSTER	1s8eA	0.183	0.780	1.670	threading_9	MKFAHLADIHLGYEQFHKQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTQRGPSVLNLLEDFGVYVIGMRKEKVENLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEA---------------NKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGD-----LPEGYLYYALGHIHKRYETSSGSPVVYPGSLERWDFGDYEVNKGFYIVEDF-----KPRFVEIKVRPIDVKIKGSEEEIRKAIKRLIPLI-PKNAYVRLNIGWRKPFD--LTEIKELLNVEYLKIDTWRI------------------------------------------------------------
10	SPARKS	3qg5c	0.242	0.877	5.084	threading_10	-KILHTSDWHLGVTSWTVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSNNPSVVALHDLLDYLKR---RTAPVVVLPGNHDWKGLKLFGNFVTSISSDITFVSFE--PVDVEAKRGQ-KVRILPFPYPDEN--------------EGDFRFFLESRLNKLYEEAL-----KKEDFAIFGHFTV--------EREIIINRAL-----IPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASPL-PLKTLYYKKID-TSALKSIRDFCRNFPGYVRVVYEEDSGILPDLGEI----DNLVKIERKSRREIEEVLRESPEEFKEELDKLDYFELFKEYLKKREENH---EKLLKILDELLDEVKKSEA-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.693 to 1s8eA SCOP code=d.159.1.4	TM-score=0.720 to 1s8eA SCOP code=d.159.1.4	TM-score=0.648 to 1s8eA SCOP code=d.159.1.4	TM-score=0.729 to 1s8eA SCOP code=d.159.1.4	TM-score=0.720 to 1s8eA SCOP code=d.159.1.4