Template-based Modeling Results for SAPC_ECOLI

Submitted Primary Sequence

>Length 296
MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE
54433232344221102200220141110000000000000001101100210121100012110121222021200000121011000000100000000000000000000100000010020010100100020010000000000000101221100000000000020000001101310222002004111011000001000010000000100100010000000000041003111030000001013002200110000000000000001000100141122324
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE
1	MUSTER	3dhwA	0.202	0.635	1.058	threading_1	---------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTGQKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD-----------
2	PROSPECT2	1ezfa	0.090	0.939	1.371	threading_2	-------------NSLKTCYKYLNQDGEMRNAVCIFYLVLRALDTLEDDMTISVEK--KVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGTERANSMGLFLQKTNIIRYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAAYNNQQVFKGPAVKAIIYQY---MEEIYHRIPDSDN
3	SPARKS	3dhwa	0.202	0.635	2.446	threading_3	---------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYIGATVMNTVLVLLVILVYLIQFAGD-----------
4	MUSTER	2onkC	0.137	0.791	1.043	threading_4	--------------------------MRLLFSALLALLSSIILLF---LLP-------VAATVT-LQLFNFDEFLKAA-SD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA-Y---YPMIAPTLIYERYLSEGLSAPVAAILILLSLAVFVALRIIG------------
5	PPA-I	3dhwA	0.202	0.635	4.668	threading_5	---------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTRIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD-----------
6	PROSPECT2	3a6pA1	0.084	1.000	1.351	threading_6	AMDQVMMDPNSTQRYRLEALKFCEEEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVVMELIANGTLNILEEENHIKEWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLYQQVKTDTSQESKAQANCRVGVAALNTLASHITAENCKLLEILCLLLNEQELQLFGDVAMHYILSAAFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFIIPKYLRASMTNLVKMGF
7	HHPRED-l	3tui_A	0.202	0.686	4.966	threading_7	----------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFVSIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYG-YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR---
8	PPA-I	2onkC	0.160	0.804	3.992	threading_8	---------------MRLLFSALLALLSSIILLFVLLPVAATVTLQLF------NFDEFLKAASD-----------------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA-YYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG------------
9	HHPRED-g	3tui_A	0.202	0.686	4.910	threading_9	----------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFVSIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYG-YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR---
10	PROSPECT2	1ejlI	0.065	0.993	1.340	threading_10	REKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTAIPAFISLLASPHAHSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNDAVEQILPTLVRLVLADSCWAISYLTDGPNERIEMVVVPQLVKLIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQD--QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGMNLLSAKDTKIIQVILDAISNIFQAAETEKLSIMIEECGGS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.748 to 3dhwA SCOP code=f.58.1.1	TM-score=0.745 to 3dhwA SCOP code=f.58.1.1	TM-score=0.828 to 1ezfB SCOP code=a.128.1.2	TM-score=0.754 to 3dhwA SCOP code=f.58.1.1	TM-score=0.771 to 2onkC SCOP code=f.58.1.1