Template-based Modeling Results for SANA_ECOLI

Submitted Primary Sequence

>Length 239
MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK
42120010000000000000000010001212221233133023210000000022242221131021002000201321312000000221232221010012001311023200001221221210012023113211000002311021001002312020000003123310011011000100000001002220311132121222331133131121212320231243324
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK
1	MUSTER	3ca8A	0.117	0.895	1.157	threading_1	-------PFPTLSPATIDAINVIGQWLAQ--DDFSGEV---PYQADCVILAGNA-----------VMPTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQNQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHDFPAEIHAWQTLK-AVLIEAMESRSL
2	SPARKS	3ca8a	0.104	0.883	1.595	threading_2	----------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNAV-----------MPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTNADSVIFINQLQGLWP--VERYLSLLTGELPRL--RDDSDGYGPRGRDFIVHDFPAEIHAWQTLKHDAVLIEAMESRS
3	PROSPECT2	3ca8A	0.108	0.854	2.153	threading_3	LSPATIDAINVIGQWLA----------------QDDFSGEVPYQADCVILAGNA-----------VMPTIDAACKIARDQQIPLLISGGIGRTTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTGDNPWLSYPGFVPQLGNNVERYLSLL--TGELPRLRDDSDGYGPR------GRDFIVHVDFPAKHDAVLIEAMESRSL
4	PPA-I	3ca8A	0.112	0.862	0.992	threading_4	----------PFPTLSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNAV-----------MPTIDAACKIARDQQIPLLISGGTIRTTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMAPRWLSYPGFVPQNQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVD----------FPAEVIHAWQTLKH
5	HHPRED-l	3ca8_A	0.113	0.891	4.964	threading_5	----PFP------TLSPATIDAINVIGQWLAQDDFSG-E-VPYQADCVILAGNAV-----------MPTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTGDNLSYPGFVPSVQQGLWPVERY-LSLLTGELPRLRDDSDGYGPRGDFIVHVDFPAEVIAWQTLDAVLIEAMESRSL-
6	HHPRED-g	3ca8_A	0.117	0.820	3.651	threading_6	LSPATI-----------DAINVIGQWLA---QD----DFSGEYQADCVILAGNAVM-----------PTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMDNPWLSYPGFVPSQGLWPVERYLSLLTG---ELPRLRDDSDGYGPRGRD----FI------VHVDFPAEVIHAWQTLKH
7	SP3	3ca8a	0.116	0.900	1.739	threading_7	----------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNA-----------VMPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTGDPRWLSYPGFVPQLGNLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHDFPAEIHAWQTLKHDAVLIEAMESRS
8	SAM-T99	3ca8A	0.126	0.732	1.134	threading_8	----------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNAVM-------------IDAACKIARDQQIP-LLISGGIGHSTRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRM--------------------------------------APRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLT
9	MUSTER	3dx5A	0.130	0.967	0.628	threading_9	SFRHQLISFTDIVQFAYENLWGTHAQNLYQEYETTERELNCLKDKTLEITISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTAGQKGSADFSERQEYVNRIRICELFAQHVLLETHPTDTLPSTLELLGEVDHPNLKINLDFLHIWESPVDSFQQWIQHYHFKNISSADYLHVFEPNNVYAAAG-------NRTGVPLFEIVNYDEIIQEVRDTDHF-GHNAKDILKAEKVLTN
10	SPARKS	1gca_	0.126	0.962	0.699	threading_10	KQNDQIDVLLAALAINLVDPAAAGTVIEKARGQNVEPSRKALDSYDKAYYVGTDSKESGVIQGDLIAKHWQANQGWDKDGKIQYVLLKGEPGHPDEARTTYVVKELNDKGIQTEQLALDTAMWDTAQAKDKMDAWLSGPNVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVANNQAKATFDLAKNLAE------GKGAADGTSWKIENKIVRVPYVDKDNLSEFTQK---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.508 to 2d13A SCOP code=c.26.2.1	TM-score=0.496 to 1e3jA SCOP code=b.35.1.2	TM-score=0.484 to 1xkqA SCOP code=c.2.1.2	TM-score=0.499 to 1ru8A SCOP code=c.26.2.1	TM-score=0.497 to 2d13A SCOP code=c.26.2.1