Template-based Modeling Results for RUVA_ECOLI

Submitted Primary Sequence

>Length 203
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
CEEEEEEEEEEEECCEEEEEECCEEEEEEECHHHHHHCCCCCCEEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
20110201012222200001000000101001200130232322000000000222121000021311120022004031011200000012120320020023321200040211133102200020132031122212222232222222222233112100100230113231012002302433220320022003213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
1	MUSTER	1cukA	0.995	0.936	3.597	threading_1	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP-------------TDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
2	SPARKS	1cuk_	0.958	0.936	5.231	threading_2	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKG-------------LHGDLFTPTDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
3	PROSPECT2	1cuk_	0.958	0.936	4.323	threading_3	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKG-------------LHGDLFTPTDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
4	PPA-I	1cukA	0.958	0.936	4.377	threading_4	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGL-------------HGDLFTPTDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
5	HHPRED-l	1cuk_A	0.995	0.931	7.433	threading_5	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP-------------TDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAA-
6	HHPRED-g	1cuk_A	0.995	0.936	6.587	threading_6	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP-------------TDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
7	SP3	1cuk_	0.995	0.936	4.811	threading_7	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP-------------TDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
8	SAM-T99	1bdxA	0.968	0.936	5.673	threading_8	MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLH-------------GDLFTPTDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
9	MUSTER	1ixrB	0.333	0.931	3.317	threading_9	MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALE-EGKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKV-------------PPHLLAGEKVESEAAEEAVMALAALGFKEAQARAVVLDLLNPKARAQDLIKEALKRLR
10	SPARKS	1bvsa	0.328	0.887	4.510	threading_10	MIFSVRGEVLEVALDHAVIEAAGIGYRVNATPSALATLN-QGSQARLVTAMVVREDSMTLYGFSDAENRDLFLALLSVSGVGPRLAMATLAVHDAAALRQALADSDVASLTRVPGIGRRGAERIVLELADKV---------------------GPVNAVRGSVVEALVGLGFAAKQAEEATDQVL-DGEATSSALRAALSLLG

Predicted Tertiary Structure


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TM-score=0.853 to 1bdxA TM-score=0.792 to native SCOP code=a.5.1.1	TM-score=0.742 to 1cukA TM-score=0.700 to native SCOP code=a.5.1.1	TM-score=0.748 to 1cukA TM-score=0.701 to native SCOP code=a.5.1.1	TM-score=0.748 to 1cukA TM-score=0.701 to native SCOP code=a.5.1.1	TM-score=0.742 to 1cukA TM-score=0.700 to native SCOP code=a.5.1.1

Experimental Structure

Download 1c7yA

SCOP code=a.5.1.1