Template-based Modeling Results for RUTB_ECOLI

Submitted Primary Sequence

>Length 230
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
54312223320202242000000002101022202021121212102200200220020034120100000101233113111211231231221212332231212101311231300330123311000111211012101011003222121000000001000100011013230100001000230123001200011012100200103100200232222424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
1	MUSTER	3kl2E	0.315	0.883	2.896	threading_1	----------LELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYG-----------ILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATS-QEEHNNAISYDFPMFSVPMTSADVIAALEGHH-----
2	SPARKS	3txya	0.289	0.826	3.534	threading_2	--------SIPTLNP-TVALVAIDLQNGIVVLPMVPQ-------SGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKT----------------DVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWS-TDAQTFALTQIFPKLGQVATAADVEAALET-------
3	PROSPECT2	3irvA	0.315	0.883	3.915	threading_3	M---SKPLVRWPINPLRTAVIVVDMQKVFCEPTG-----ALYVKSTADIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTG--------------RMRDLYPNVDQILARHDPDVEVIEALAPQSDDVIVDKLFYSGFHNTDLDTVLRARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSDANAAMDAADVQRISLTTIAYEFGEVTTTAEVIRRIESAY-----
4	PPA-I	3kl2E	0.315	0.883	3.508	threading_4	----------LELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPY-----------GILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATS-QEEHNNAISYDFPMFSVPMTSADVIAALEGHH-----
5	HHPRED-l	2fq1_A	0.234	0.891	3.305	threading_5	LPDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGE------NCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRA-----------------LLNDMWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSR-DEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAAL-
6	HHPRED-g	2fq1_A	0.233	0.896	2.950	threading_6	LPDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWG------ENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLND-----------------MWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDE-HLMSLKYVAGRSGRVVMTEELLPAPIPASKAALR
7	SP3	3txya	0.289	0.826	3.765	threading_7	--SIP------TLNP-TVALVAIDLQNGIVVLPMVPQS-------GGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKT----------------DVPPSPPNLDPEWSAFAPALGVQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWS-TDAQTFALTQIFPKLGQVATAADVEAALET-------
8	SAM-T99	3kl2E	0.320	0.870	3.692	threading_8	----------LELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELT-----------RHPYGILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATSQEEHNNAISYD-FPMFSVPMTSADVIAALE--------
9	MUSTER	3irvA	0.305	0.883	2.809	threading_9	---MSKPLVRWPINPLRTAVIVVDMQKVFCEPTGALYVKSTA-----DIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTGR--------------MRDLYPNVDQILARHDPDVEVIEALAPQSDDVIVDKLFYSGFHNTDLDTVLRARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSDANAAMSAADVQRISLTTIAYEFGEVTTTAEVIRRIESAY-----
10	SPARKS	3ot4a	0.199	0.852	3.485	threading_10	LGSYERQGFGAALLKAPYGLLIVDFVNGFADPAQFGG------GNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGN---------------IFSIKVPGMLTLKEHAPASAIVPQLAPQAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTS-GVRASVVDAMSAGFRPLVLSDCVGDRA-LGPHEANLFDMRQKYAAVMTHDEALA-----------

Predicted Tertiary Structure


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TM-score=0.829 to 1j2rA SCOP code=c.33.1.3	TM-score=0.829 to 1j2rA SCOP code=c.33.1.3	TM-score=0.858 to 1j2rA SCOP code=c.33.1.3	TM-score=0.814 to 1j2rA SCOP code=c.33.1.3	TM-score=0.829 to 1j2rA SCOP code=c.33.1.3