Template-based Modeling Results for RUMA_ECOLI

Submitted Primary Sequence

>Length 433
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
CCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEEECCCCEEEEECCEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
5422332444333322020101102120200020221000030003311010101223531020200210231332321402101101001111021221130112001300433123211312211111020001113533200000123101100103202001320220022012001302323310101001022110000110232222113102202311000001023222011022321111122020201121001011200220011013103133311000000000100000022111000010032002201200431203102010120220022112333211000010022002000220051211100000000000010020004210201200000101201101000002337
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
1	MUSTER	1uwvA	0.933	0.938	3.614	threading_1	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLKHDVSE-VIADVPWGYRRRARLSLNYLPKTQ-QLQGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA-RHLGHVELVQATS-GTLILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEP-WYDSNGLRLTFSPRDFIQVN-AGVNQKVARALEWLDVQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAG-VQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLA--LDFPHTGHLESVLFSR---
2	SPARKS	1uwva	0.946	0.938	6.088	threading_2	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLKHDVSEVI-ADVPWGYRRRARLSLNYLPKTQQLQG-FRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA-RHLGHVELVQATSGTLILRH-TAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEP-WYDSNGLRLTFSPRDFIQVNAGVNQKV-ARALEWLDVQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGV-QQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLA--LDFPHTGHLESVLFSR---
3	PROSPECT2	2jjqA	0.253	0.868	5.250	threading_3	M----------------RGVIRKLNDDGFGVLK----GILVPFSAPGDEIIVERVERVKKRRVASQWKLVRSSPL-----------RVGCTLQHLNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAIT------KDGIGFR-EKWWKIVDIDECPVFGKTSREAIERLKEFIEEEKIKKDEGFLRYMVLFTEEVMVNFVTKEGNLPD---PTNYFDFDSIYWSVNRSGDIERFWGKEFIRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSELV---EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDRE-------VSVKGFDTVIVDPPRAGLPRLVKRLNREKPGVIVYVSCNPETFARDVKML---DYRIDEIVALDMFPHTPHVELVAKL---V
4	PPA-I	1uwvA	0.926	0.938	6.335	threading_4	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLKHDVSE-VIADVPWGYRRRARLSLNYLPKTQ-QLQGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAR-HLGHVELVQATSG-TLILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEP-WYDSNGLRLTFSPRDFIQVNAGVNQKVARALEWLD-VQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAG-VQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLA--LDFPHTGHLESVLFSR---
5	HHPRED-l	1uwv_A	1.000	0.938	7.095	threading_5	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARL-KHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQ-GFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA-RHLGHVELVQATSGTL-ILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGE-PWYDSNGLRLTFSPRDFIQVNAGVNQK-VARALEWLDVQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGV-QQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLA-LD-FPHTGHLES-VLFSR--
6	HHPRED-g	1uwv_A	1.000	0.938	6.431	threading_6	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARL-KHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQ-GFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA-RHLGHVELVQATSGTL-ILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGE-PWYDSNGLRLTFSPRDFIQVNAGVNQK-VARALEWLDVQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGV-QQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLA-LD-FPHTGHLES-VLFSR--
7	SP3	2jjqa	0.255	0.868	5.902	threading_7	----------------MRGVIRKLNDDGFGVLK----GILVPFSAPGDEIIVERVERVKKRRVASQWKLVRSSPLRV-----------GCTLQHLNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAIT------KDGIGFR-EKWWKIVDIDECPVFGKTSREAIERLKEFIEEWNIKKDEGFLRYMVLRTEEVMVNFVTKEGNLPD---PTNYFDFDSIYWSVNRSKSDIERFWGKEFIRERLDVDYLIHPNSFFQTNSYQAVNLVRKVSELVE---GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNV-DAEFEVASDRE------VSVKGFDTVIVDPPRAGLPRLVKRLNREKPGVIVYVSCNPETFARDVKML---DYRIDEIVALDMFPHTPHVELVAKLV---
8	SAM-T99	1uwvA	0.953	0.933	7.592	threading_8	--------------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALAR-LKHDVSEVIADVPWGYRRRARLSLNYLP-KTQQLQGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA-RHLGHVELVQATSG-TLILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVGEPWYDS--NGLRLTFSPRDFIQVNAGVNQK-VARALEWLDVQPEDRVLDLFCG-GNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAA--VQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAL--DFPHTGHLESV-LFSR--
9	MUSTER	2vs1A	0.252	0.880	3.109	threading_9	-------------GSHMRGVIRKLNDDGFGVLK----GILVPFSAPGDEIIVERVERVKKRRVASQWKLVRSSPLRVK--------CGGCTLQHLNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAITKD------GIGFR-EKWWKIVDIDEP-VFGKTSREAIERLKEFIEEENIKKDEGFLRYMVLRTEEVMVNFVTKEGNLPD---PTNYFDFDSIYWSVNRSKSDIERFWGKEFIRERDDVDYLIHPNSFFQTNSYQAVNLVRKVSELV---EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-------KGFDTVIVDPPRAGLPRLVKRLNREKPGVIVYVSCNPETFARDVKML---DYRIDEIVALDMFPHTPHVELVAKLV---
10	SPARKS	2jjqa	0.255	0.868	5.899	threading_10	----------------MRGVIRKLNDDGFGVLK----GILVPFSAPGDEIIVERVERVKKRRVASQWKLVRSSPLRV-----------GCTLQHLNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAIT------KDGIGFR-EKWWKIVDIDECPVFGKTSREAIERLKEFIEEWNIKKDEGFLRYMVLRTEEVMVNFVTKEGNLPD---PTNYFDFDSIYWSVNRSKSDIERFWGKEIRERLDDVDYLIHPNSFFQTNSYQAVNLVRKVSELV---EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNV-DAEFEVASDREV------SVKGFDTVIVDPPRAGLPRLVKRLNREKPGVIVYVSCNPETFARDVKML---DYRIDEIVALDMFPHTPHVELVAKLV---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.963 to 1uwvA TM-score=0.953 to native SCOP code=b.40.4.12	TM-score=0.962 to 1uwvA TM-score=0.953 to native SCOP code=b.40.4.12	TM-score=0.963 to 1uwvA TM-score=0.955 to native SCOP code=b.40.4.12	TM-score=0.827 to 1uwvA TM-score=0.848 to native SCOP code=b.40.4.12	TM-score=0.965 to 1uwvA TM-score=0.951 to native SCOP code=b.40.4.12

Experimental Structure

Download 2bh2A

SCOP code=b.40.4.12