Template-based Modeling Results for RTCB_ECOLI

Submitted Primary Sequence

>Length 408
MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
CCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEECCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCHHHCCCCCCCHHHHHHHHHCCEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
542211233201010004222112201210120041220131000021001031000000000310000000000000000002021213202310220130022101212222423323121222212220210112221321223113101221152003112010001000123320000001012100110021002001310231232122431100232131012003000001100100110002100200221143224323220010010211101222221120000131012132111000101211200002012123000101201111111120242022310232112010243231232012013203100211231011011011100043
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
1	MUSTER	1uc2A	0.291	0.995	2.829	threading_1	VPPKFDKRMRVPGRVYADEVLKNDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDN-GYGWERDAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHEVDKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLYVRAASMRVVAEEAPGAYKNVDNVVKVVSGIAKLVARMRPIGVAKG
2	SPARKS	1uc2a	0.283	0.995	3.072	threading_2	EIPKFDKRMRVPGRVYADEVLLEKRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDG-AKWAVDNGYGWDPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHEVDKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNVRAASMRVVAEEAPGAYKNVDNVVKVVSGIAKLVARMRPIGVAKG
3	PROSPECT2	1uc2A	0.275	0.998	5.249	threading_3	VVPKFDKRMRVPGRVYADEVLLEKMTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAEGGRMEGADPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEGDLGMDI-VYDVAHNIGKVEEHEVDKVIVHAVPRLYRDVGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELIYVRAASMRVVAEEAPGAYKNVDNVVKVVSGIAKLVARMRPIGVAKG
4	PPA-I	1uc2A	0.281	0.993	4.960	threading_4	PKFD--KRMRVPGRVYADEVLKNDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDNGMEGADPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHEVDKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNVRAASMRVVAEEAPGAYKNVDNVVKVVAGIAKLVARMRPIGVAKG
5	HHPRED-l	1uc2_A	0.286	0.993	10.042	threading_5	IRWEIPKRMRVPGRVYADEVLLNDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAKEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWA-VDNGYGADPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHERVKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELIYVRAASMRVVAEEAPGAYKNVDNVVKVVAGIAKLVARMRPIGVAK-
6	HHPRED-g	1uc2_A	0.290	0.990	1.555	threading_6	IPK-FDKRMRVPGRVYADEVLLNDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWA-VDNGYGWERDAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDKGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEDLGMD--IVYDVAHNIGKVEEHEVDKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELIYVRAASMRVVAEEAPGAYKNVDNVVKVEAGIAKLVARMRPIGVAKG
7	SP3	1uc2a	0.293	0.995	1.633	threading_7	EIPKFDKRMRVPGRVYADEVLLEKRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVD-NGYGWDPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHEVDKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGTAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNVRAASMRVVAEEAPGAYKNVDNVVKVVSGIAKLVARMRPIGVAKG
8	SAM-T99	1uc2A	0.288	0.988	9.971	threading_8	----FDKRMRVPGRVYADEVLLEDRTLEQATNVAMLPGIYKYSIVMPDGHQGYGFPIGGVAAFDGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDNGYGWEDPEAVSQRAKQRGAPQLGSLGSGNHFLEVQVVDEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWPDRELVSVPFQSEEGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEG-DLGMDIVYDVAHNIGKVEEHEVVKVIVHRKGATRAFPGQPVLIPGSMGTASYILAGGAMKETFGSTCHGAGRVLSRKAATRQYRRQELLNRGIYVRAASMRVVAEEAPGAYKNVDNVVKVVSGIAKLVARMRPIGVAKG
9	MUSTER	2epgB	0.288	0.929	2.456	threading_9	FPYYRIQGKRVDAVFFASKEEAENYASLQQLNVATLPGIVE-PALAPDIHWGYGFPIGGVAAFDGVVSPGGVGFDINCGVRLLASHLTLEDLLPRQKELADALYRLVPSGRDVRFSKRELKEILKYGYPEDVRFIESQGRLPWANDKVSERAFERGAPQIGTLGSGNHFLEVQYVDKGQVTVLIHTGSRGLGHQVCQDYVERFLKVAPRYGIELVDKQLAAAPIKS-PEGQDYLQAAAAANFAFANRQLIAHFVREAFEKVG---FTPRDHGLRVLYDLAHNNAKFEEHRGRRVLVHRKGATRAFGGQPVLVPGDG-RYSYVLAGTKAEVSFGSSCHGAGRNLVKELAERGI-----------------------LVRAATDVSLVVEAVAGIGKKVARLRPLIVVKG
10	SPARKS	2p9ba	0.117	0.880	0.492	threading_10	IVEPFA-LAHATIVTGDKAGTILRNTI-----VVGADGRIEQVAPSIETSIPAEY---HYLDGTGKIVPGLINAHTHLFSTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPL-AIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIGGVTDAQEIQSCDEAHQYGVIVGAHAQSPEGVRRSLLAGVDELIGFRHNPNALRGYSALIPTLSAGLPLTLLGQDVTGITDIQLENSKNVVGG-VSGARQAHEAGLIGVGTDTGTFVPQYA------TWRELELLVAYAGFSPAE----ALHAATAVNASIL----GVDAETGSLEVGK-------SAANPLDDLRALEHPALVIAAG-HPVWRPGPKRFADIDALLDEAYA----------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.908 to 1uc2A SCOP code=d.261.1.1	TM-score=0.905 to 1uc2A SCOP code=d.261.1.1	TM-score=0.908 to 1uc2A SCOP code=d.261.1.1	TM-score=0.911 to 1uc2A SCOP code=d.261.1.1	TM-score=0.912 to 1uc2A SCOP code=d.261.1.1