Template-based Modeling Results for RSSA_ECOLI

Submitted Primary Sequence

>Length 301
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI
CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEECCEEEECCEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI
5542210000110001000000002003512030000000000000000000321210021022112220021011113321103022002003310233303202230000000032122100231101100100000010020000321000110000100011033110100000003232322333222221233223223212111201221122224422222201200110021012212212222231000010203301101131022002101200231032013113334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI
1	MUSTER	1oxwC	0.141	0.963	1.299	threading_1	LGEVT-VLSIDGGGIRGIIPATILEFLEGQDARLDVIGGTSTGGLLTAISTPNENNRPFKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLYDISYSTAAAPTYFPPHYFVGFNLVDGAVAVADPALLSISVATRLAQKDPAFASIRSLNYKKLLLSLGTGTTSEFDKTYTAKEAAT-----WTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNN--LRVENALTGTTTED-EANELLVQVGENLLKKYEEALKRFAK--L
2	SPARKS	1oxwa	0.144	0.970	2.341	threading_2	-LGEVTVLSIDGGGIRGIIPATILEFLEGQNNAFDVIGGTSTGGLLTAISTPNENNRPAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNKYDISYSTAAAPTYFPPHYFVGFNLVDGAVVAD-PALLSISVATRL-----AQKDPAFASIRSLNYKKLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDDASE--ANELLVQVGENLYEEALKRFAKLLSDRK
3	PROSPECT2	1oxwa	0.118	0.953	2.497	threading_3	LGEV-TVLSIDGGGIRGIIPATILEFLEGQLQEDDVIGGTSTGGLLTAISTPNENNRPAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNKYDISYSTAAAPTYFPPHYFVTNTSNGDEYEVADPALLSISVATRLAQKDPAFASIRSLNYKKLLLSLGTGTTSEFDKTYTAKEA---------ATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKLRVQENEDDASEAN----ELLVQVGENLLEEALKRFAKLLANKA
4	PPA-I	1oxwC	0.132	0.983	1.666	threading_4	QLGEVTVLSIDGGGIRGIIPATILEFLEGQADYFDVIGGTSTGGLLTAISTPNENNRPFKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNKYDISYSTAAAPTYFPPHYFVTFNLVDGAVAVADPALLSISVATRLAQKDPAFASIRSLNYKKLLLSLGTGTTSEFDKTYTAKEAAT-----WTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDSEANELLVQVGENLLKKYEEALKRFAKLLS
5	HHPRED-l	1oxw_A	0.136	0.877	6.694	threading_5	GE-VTV-LSIDGGGIRGIIPATILEFLEGQLQYFDVIGGTSTGGLLTA-ISTPNENNIVPFYF-EHGPQIF--NPSGQILGPKYDGKYL-QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSK-YDISYSTAAAPTYFPPHYFVTNNLVDGAVAVADPALLSISVNYKK-LLLSLGTGTTSEFDKTYTAKEA----ATWT-------AVHW-LVI-----------QK-TDAASSY-TDYYLSAFQALDSKNNYVQENALE-DDASEAN-ELLVQVGENLLKEALKRFAKLLSDR-
6	HHPRED-g	1oxw_A	0.142	0.890	6.603	threading_6	LGE-VTVLSIDGGGIRGIIPATILEFLEGQLQEFDVIGGTSTGGLLTA-ISTPNENAAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYL-QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSN-YDISYSTAAAPTYFPPHYFVTNNLVDGAVAVADPALLSISVNYKK-LLLSLGTGTTSEF-----------DKTYTAKEAATWTAVH-----------W-LVIQK-TDAASSY-TDYYLS-TAFQDSKNNYVQENALTGE-DDASE-ELLVQVGENLLKEALKRFAKLLSDRL
7	SP3	1oxwa	0.128	0.983	0.633	threading_7	LGEV-TVLSIDGGGIRGIIPATILEFLEGQLQEFDVIGGTSTGGLLTAISTPNENNRPFAAAKEIVPFYFEHGPQI-FNPSGQILGGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKDAKYDISYSTAAAPTYFPPHYFVTFNLVDGAVTVADPALLSISV-ATRLAQKDPAFASIRSLNYKKLLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDDASE--ANELLVQVGENLYEEALKRFAKLLSDRK
8	SAM-T99	1oxwC	0.126	0.947	0.951	threading_8	AQLGEVTLSIDGGGIRGIIPATILEFLERLADYFDVIGGTSTGGLLTAISTPNENFAAAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLYDISYSTAAAPTYFPPHYEYEFNLVDGAV---------ATVADPALLSISVATRLAQKDPAFASIRSTAVHWLVIQKTDAASSYTDYYLSTAFQALDSKNNYLRVQENALTGTTTEDDASEANE----LLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRA---
9	MUSTER	3i6dB1	0.139	0.930	0.614	threading_9	--KKHVVII---GGITGLAAAFYMEKEIKLPLELTLVVGGKIGYIIGPDSFLERKKSAPQLVKDLGLEHLLVNNAYVLVNRTLHGLQTLVEEIEKQLKLTKV-YKGTKVTKLSHS-GSCYSLELDNGVTLDADSVIVTAPHMLSSVANVALGFPEGSVHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKGKAGDESIVDLSDN-DIINIVLEDLKKVMNINGEPEMTCVTRWHESMHKQRIKELREALASAYPGVYM-------ASFEGVGIPDCIDQGKAAVSDALTYLFS------
10	SPARKS	2xlpa	0.101	0.953	1.039	threading_10	--ATRIAIL--GAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNLDENGEPVKECLEFADYTFDEHFGKPIAS--YPPREVLWDYIKGRVEKAGVRKYFNEFTVTVQDHTTDTIYSAAFDYV---VCCTPEFEGFFGALEFKDTVLLVGSYSAEDIGSQCYKYGAKKLISCYRTAPMGYKWPENWDERPNLVRVDLCTGYIHHFPFLNDDLRLVTNNRLWPLNARDVIMGSKEEMKADSMAWREKELTLV-----TAEEMYTYQGDYIQNLIDMTIPATNKTFLEWKHHKKENI

Predicted Tertiary Structure


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TM-score=0.874 to 1oxwC SCOP code=c.19.1.3	TM-score=0.864 to 1oxwC SCOP code=c.19.1.3	TM-score=0.874 to 1oxwC SCOP code=c.19.1.3	TM-score=0.805 to 1oxwC SCOP code=c.19.1.3	TM-score=0.891 to 1oxwC SCOP code=c.19.1.3