Template-based Modeling Results for RSMG_ECOLI

Submitted Primary Sequence

>Length 207
MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCEEEEEEEEECCCCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI
323101200330212023301210220020023213110001132122001200010000021122210000111110000000002230200001021310200220033050320200101023023323010000101020310010022002330100002132032101203340202100202022232210001011233
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI
1	MUSTER	1jsxA	0.938	0.928	3.183	threading_1	MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNEML-------VRHILDSIVV------PYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVP--DGERHLVVIKANKI
2	SPARKS	1xdza	0.340	0.995	4.718	threading_2	MIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAAA-EEELNAGKKAGELENIHSFKLPIEESDRNIMVIRKIKN
3	PROSPECT2	3g88A	0.290	1.000	3.781	threading_3	MFGKHPGGLSERGRALLLEGGKALLDLKPHLEAFSRLYALLQEAGEEEVVVKHFLDSLTLLRLPGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARREAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELALERLGGRLGEVLALQLPLSGEARHLVVLEKTAP
4	PPA-I	1jsxA	0.917	0.932	4.063	threading_4	MLNKLSLLLKDAGISLT---DHQKNQLIAYVNML---------HKWNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVP--DGERHLVVIKANKI
5	HHPRED-l	1jsx_A	1.000	0.928	3.838	threading_5	MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWN------------EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVP--DGERHLVVIKANK-
6	HHPRED-g	1jsx_A	1.000	0.932	5.137	threading_6	MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWN------------EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVP--DGERHLVVIKANKI
7	SP3	1xdza	0.340	0.995	4.743	threading_7	MIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAAA-EEELNAGKKAGELENIHSFKLPIEESDRNIMVIRKIKN
8	SAM-T99	1xdzA	0.333	1.000	5.856	threading_8	NIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFDVRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAAAEEELNAGKKLGGELENIHSFKLPIEESDRNIMVIRKIKN
9	MUSTER	1xdzA	0.335	0.995	3.112	threading_9	NIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRESYDIVTARAVARLSVLSELCLPLVKKNGLFVALKAAA-EEELNAGKKGGELENIHSFKLPIEESDRNIMVIRKIKN
10	SPARKS	3g88a	0.295	1.000	4.286	threading_10	MFGKHPGGLSERGRALLLEGGKALLDLKPHLEAFSRLYALLQEAGEEEVVVKHFLDSLTLLRLPGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARREAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPAGRLGEVLALQLPLSGEARHLVVLEKTAP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.958 to 1jsxA TM-score=0.991 to native SCOP code=c.66.1.20	TM-score=0.964 to 1jsxA TM-score=0.997 to native SCOP code=c.66.1.20	TM-score=0.922 to 1xdzA TM-score=0.855 to native SCOP code=c.66.1.20	TM-score=0.849 to 1jsxA TM-score=0.877 to native SCOP code=c.66.1.20	TM-score=0.958 to 1jsxA TM-score=0.991 to native SCOP code=c.66.1.20

Experimental Structure

Download 1jsxA

SCOP code=c.66.1.20