Template-based Modeling Results for RSMD_ECOLI

Submitted Primary Sequence

>Length 198
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
554343333120000002131241311322212111320120011001210230100100000000001002230100000111320021013002203212020010200100344222000000101154110220010023221024200000102332312211210100222212200010012233343539
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD
1	MUSTER	3p9nA	0.345	0.894	3.304	threading_1	---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
2	SPARKS	3p9na	0.345	0.894	4.532	threading_2	---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
3	PROSPECT2	3p9nA	0.345	0.894	4.191	threading_3	---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDSVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
4	PPA-I	3p9nA	0.345	0.894	3.697	threading_4	---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
5	HHPRED-l	2fpo_A	1.000	0.884	3.489	threading_5	---------GQIRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
6	HHPRED-g	2fpo_A	1.000	0.884	3.965	threading_6	---------GQIRIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
7	SP3	3p9na	0.345	0.894	4.839	threading_7	---------SMTRIIGGVAGGRRIAVPP----RGTTDRVRESLFNIVTARLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAATTSPVDLVLADPPYNVDDVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL--------
8	SAM-T99	2fpoC	1.000	0.904	5.321	threading_8	---------GQIRIIGGQWRGRKLPVPD--GLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIE-DRAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
9	MUSTER	2fpoC	0.994	0.904	3.261	threading_9	---------GQIRIIGGQWRGRKLPVPD--GLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIED-RAVSQQLIKNLATLKAGNARVVNSNA-SFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------
10	SPARKS	2fpoa	0.966	0.884	4.026	threading_10	---------GQIRIIGGQWRGRKLPV------PDSTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIED-RAVSQQLIKNLATLKAGNARVVNSNASF-LAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQ------

Predicted Tertiary Structure


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TM-score=0.857 to 2fhpA TM-score=0.893 to native SCOP code=c.66.1.46	TM-score=0.851 to 2fpoC TM-score=0.890 to native SCOP code=c.66.1.46	TM-score=0.857 to 2fhpA TM-score=0.893 to native SCOP code=c.66.1.46	TM-score=0.853 to 2fhpA TM-score=0.888 to native SCOP code=c.66.1.46	TM-score=0.857 to 2fhpA TM-score=0.893 to native SCOP code=c.66.1.46

Experimental Structure

Download 2fpoC

SCOP code=c.66.1.46