Template-based Modeling Results for RSEP_ECOLI

Submitted Primary Sequence

>Length 450
MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
332101100000000000000000000000320202022000001210021123320100000000100020233323322232332112321102200220102001000000000000112232231100101320101204023111000022231321310022113322332020201122331212021323322232343222211113230231210001122301013030320010010222202202100200332323100020113222110200022222323100000021322212332110110001100110022012002100100020021312132020101002000200210011000000000000000100101001000000000120311312330120012000000000000000200252
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
1	MUSTER	3qxyA	0.114	0.880	0.722	threading_1	-LDPVACFLSWCRRVG--LELSP----------KVAVSRQGTVAGYGMVARESQAG--ELLFVVPRAALLSQHTCSIGGLLERERVA-LQSQSGWVPLLLALLHELQA-------WRPYFALWPELGRL--EHPMFWPEEERRCLLQGTGVPEAVEKDLANYQSIVLPFMEAHPDL-FSLRVRSLELYHQLVALVMAYSFQEPLEKEPNSPVMDILNHLANHNANLEYSANCL--ATQPIPKGHEIF-NTYGQMANWQLIHMYYPDNTDDTADIQMV---TVREAALQGTKTEAERHLVERWDFLCKLEMVGEEGAFVIGREEVL-TEEELTTTLKVLCMPAEEFRELKDQKREEGSLTITN------IPKLKASWRQLLQNSVLLTLQT-----YATD--------LKTDQGLLSNK--EVYAKLSWREQQALQVRYGQKMILHQLLEL
2	SPARKS	3pv2a	0.166	0.442	2.040	threading_2	VKDVAQQIIKF--------------------------------------------------------GSIHLMGIFVQHLTPELA-QAM--------------G-----------------YPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLAAFEQESPPQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQ-EKKKELLVQVLRGPGSMYLLVI------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1de4c	0.106	0.984	1.463	threading_3	LDDLKRKLSEKLDSTDFTSTIKLLKDENLAREFKLSFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGSESKNVKLTVSNVLKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWGPG-------AAKSGVLKDGFQPSRIFASWSAGDFGSVTEWLEGYLSSLHLKAFTYINLGTSNFKVSASPKHPVTGQFLYQDSNWASKVEKLTLDNSFCFCEDELNKVARAAAEVAGQFVIKLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFVMKKLNDRVMRVFWGSGSHTLPALLENLKLRKQNNGAFNETLFRNQLALATTIQGAANALSGDVWDI
4	PPA-I	3id4A	0.935	0.207	1.392	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKGKASPV-----------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	4a8c_A	0.149	0.596	1.865	threading_5	----------PFEGLGSGVIINASGYVLTNNHVRVGDFAVAVGNPFGIVSALGRS--G--LNLEGLENFIQTDAS----INRGNAGGALLNLN-GELIGINTAILGIGFAIPLIDFGEILLFNLVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAMIPALEGATLSDGQLGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAK-PAIIALQIVRGNESIYLLMR------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	3rle_A	0.212	0.409	1.793	threading_6	---------------------------------------------------------------------------------------------------------------------------VEIPGYHVLRVQENSPGHRAGLEPFDFIVSINGSRLNKDNDTLKDLLKANVEKPVK-LIYSS-KT------LELRETSVTPSNLGGQGLLGIRFCSFDNENHVLEVESNSPAALAGLRPSDYIIGADTV--NESEDLFSLIETHEAKPLKLYVYNTDNCREVIITPNSAWGGE---GSLGCGIGYGYLHR-----IPTRPFE-----------------------------------------------------------------------------------------------------------------------------
7	SP3	3pv2a	0.173	0.618	1.668	threading_7	MAPVLKNIMPAIVNVAVVIIDPNNGDHVIRNASLITVT-LQDGLKARLIGGDSETD----LAVLKIDASLVIGD--SDKLEVGDFVVAFGSQSA--TFGIVSAGALVNINMVKDVAQQIIKFGVQHLTPLVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLAAFEQESPPQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQ-EKKKELLVQVLRGPGSMYLLVI------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	3id4A	0.935	0.207	2.477	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKGKASPV-----------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1rrvA	0.121	0.842	0.674	threading_9	MRVLLSVRGDVEIGVALADRLKALGV---------QTRMCA----PAAEERLAEVG----VPHVPVGLMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPVHI-SSSGRGIADAAKVAVE--------AIRAQG---------------RRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVA---------------VIHH-------GSAGTEHVATRAVIPRNTDQPYFAGRVAALGIGVA--HDGPTPTF-ESLSAALTTVLAPETRARAEAVAGMVGAAAAADLVLAAVGR-----
10	SPARKS	3id2a	0.978	0.200	1.896	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVI---------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.673 to 1p0yB SCOP code=a.166.1.1	TM-score=0.617 to 1diqA SCOP code=d.58.32.1	TM-score=0.535 to 2z9iA SCOP code=b.36.1.4	TM-score=0.647 to 1suvA SCOP code=i.21.1.1	TM-score=0.425 to 2z9iA SCOP code=b.36.1.4