Template-based Modeling Results for RSEA_ECOLI


  Submitted Primary Sequence

>Length 216
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
CCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
443310011122311122002202313300310210000110042321312300001100100332314322221332231233224021122011001200100000000100000011122323233323111121022223111000212232223423232122123202310121111121223323233232332223122222223335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1MUSTER1or7C1.0000.3061.026threading_1MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
2PROSPECT23bkhA0.0720.9631.028threading_2-HHHHHGSLRKGDRGDEQLQTLLNLGNNTFNQVVKFQK-------DNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPPTANKSRAAATPVNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTIENYGKYGVLTDPTGRPVLKREPTDTDLYLAHFFGPGAARRFPKEAQANPSIFYNKDGSPKTIQEVYNLDGKVAAHRK
3PROSPECT21otvA0.0860.9171.011threading_3LSPQAFEEMHNGDATRKQIQGWVAPDAQTRRKWVQRILDHD---GSHGEDGGIEAWLRLGEAVGLS-----RDDLLSERHVLPGVRF--AVDAYLNFARRACWQEAACSSLTELF--------APQIHQSRLDSWPQHYPWIKSQANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSDAMTMAYALQRPPYHTVTDKAAWHTTRLVLEHH
4SPARKS1or7c1.0000.3061.230threading_4MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
5PROSPECT21or7c1.0000.3061.177threading_5MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
6PPA-I1or7C1.0000.3061.929threading_6MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
7HHPRED-l1or7_C1.0000.3067.058threading_7MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
8HHPRED-g1or7_C1.0000.3066.552threading_8MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
9SP31or7c1.0000.3060.507threading_9MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
10SAM-T991or7C1.0000.3064.220threading_10MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

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TM-score=0.628 to 1or7C
SCOP code=a.180.1.1
TM-score=0.470 to 1slyA
SCOP code=a.118.5.1
TM-score=0.628 to 1or7C
SCOP code=a.180.1.1
TM-score=0.560 to 1otwA
SCOP code=a.132.1.4
TM-score=0.628 to 1or7C
SCOP code=a.180.1.1