Template-based Modeling Results for RSD_ECOLI


  Submitted Primary Sequence

>Length 158
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
43330231134030012001100220220010003013132143222422330022003000100110001001200230332232220130011023002100201220232221131022023102300300221121112002101221424334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
1MUSTER2p7vA1.0000.9563.622threading_1MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
2SPARKS2p7va0.9930.9563.566threading_2MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
3PROSPECT22p7vA0.9930.9562.711threading_3MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
4PPA-I2p7vA1.0000.9565.846threading_4MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
5HHPRED-l2p7v_A1.0000.94911.326threading_5MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHP-
6HHPRED-g2p7v_A1.0000.9569.750threading_6MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
7SP32p7va0.9930.9566.180threading_7MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
8SAM-T992p7vA0.9930.9567.398threading_8MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGN-------EKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
9MUSTER2q24B0.1340.9430.774threading_9FSEELERIAREAGVGSGTLYRNFPTREALIEAAYRNE-CDSVPGLLAELPAEALRAWTRRFIDYA-TAKLGADALRAVVASGGDPYGDSRQLIQSALTALDAAAAA---EIRSDIRSTDFAALAGIALTSSR--PDQRAQAERLLDLVLDGLR--PTA
10SPARKS2f07a0.0920.9680.652threading_10VISEISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLQIKGRLHGDEDF-WTVLDILIDETFLITER-HKDIIVLCYSGLAIDHSMEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERVEVYKKEIFTFLKRSLGTA---

  Predicted Tertiary Structure

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TM-score=0.663 to 1h6gA
TM-score=0.998 to native
SCOP code=a.24.9.1
TM-score=0.663 to 1h6gA
TM-score=0.998 to native
SCOP code=a.24.9.1
TM-score=0.662 to 1h6gA
TM-score=0.992 to native
SCOP code=a.24.9.1
TM-score=0.662 to 1h6gA
TM-score=0.992 to native
SCOP code=a.24.9.1
TM-score=0.663 to 1h6gA
TM-score=0.998 to native
SCOP code=a.24.9.1

  Experimental Structure

Download 2p7vA
SCOP code=a.24.9.1