Template-based Modeling Results for RLMA_ECOLI

Submitted Primary Sequence

>Length 269
MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
CCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
54220120332022253001032213012032000000113233232211001001011111210112101200011022212331100000000201000100220230200001003200200143133020000003302122200000000101110310021043200000000023111101110123232322223103102222111000102031310000031001013032300210143322201000102101345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
1	MUSTER	1p91A	0.996	0.970	3.108	threading_1	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAE--QARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP-RLRGDEAVALL-QTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
2	SPARKS	1p91a	0.996	0.970	4.187	threading_2	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAE--QARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP-RLRGDEAVALL-QTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
3	PROSPECT2	1p91A	0.992	0.970	4.213	threading_3	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAE--QARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDT-SDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP-RLRGDEAVALL-QTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
4	PPA-I	1p91A	0.950	0.970	3.684	threading_4	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDS--AEQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP--RLRGDEAVALLQTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
5	HHPRED-l	1p91_A	1.000	0.967	3.989	threading_5	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAE--QARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP-RLRGDEAVALLQ-TPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRS-
6	HHPRED-g	1p91_A	1.000	0.970	4.915	threading_6	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAE--QARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYP-RLRGDEAVALLQ-TPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
7	SP3	1p91a	0.946	0.970	4.295	threading_7	-SFSCPLCHQPLSREKNSYICPQRHQFD-AKEGYVNLLPVQHKRSRDPGDSAEQ--ARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSD-TSDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHL-ELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPRLR--GDEAVALLQTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
8	SAM-T99	1p91A	0.946	0.970	5.235	threading_8	-SFSCPLCHQPLSREKNSYICPQRHQFDA-KEGYVNLLPVQHKRSRDPGDSAEQ--ARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS-DAIIRIYAPCKAEELARVVKPGGWVITATPGPRH-LELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPRLRGDE--AVALLQTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY
9	MUSTER	2yqzA	0.164	0.792	1.217	threading_9	---------------------------------------------------SSALLRAAYAYDRAHPPEVAGQIATAASAVHPKEEPVFLELGVGTGRIALPLIAR--GYRYIALDAD-AALEVFRQKIAKVQVVQADARAIPLPDESVHGVIVVHLWHLLAEAIRVLKPGGALLEGWDQASPEWTLQERWRGFPVERGLHAKRLKGLKPRTREVARWREERTPREALEALSLYSFTQGLPEPVHARVERDRPFPVEKRFLLRVSRL--
10	SPARKS	3mgga	0.194	0.729	1.825	threading_10	-----------------------------------------------------------------------ETLEKLLHHDTVPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTKNVKFLQANIFSLPFEDSSFDHIFVCFVEEALKSLKKVLKPGGTITVIEGDGKKAIEAWNCLIGNSLVGRQIYPLLQGFEKIRVEPRVYIDSSKPELVDPVEGVKEQSLKIKEEEWEKGIEEHGGTFCYTFFKGWGTK--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.982 to 1p91A TM-score=0.997 to native SCOP code=c.66.1.33	TM-score=0.979 to 1p91A TM-score=0.994 to native SCOP code=c.66.1.33	TM-score=0.982 to 1p91A TM-score=0.997 to native SCOP code=c.66.1.33	TM-score=0.981 to 1p91A TM-score=0.996 to native SCOP code=c.66.1.33	TM-score=0.982 to 1p91A TM-score=0.996 to native SCOP code=c.66.1.33

Experimental Structure

Download 1p91A

SCOP code=c.66.1.33