Template-based Modeling Results for RS1_ECOLI

Submitted Primary Sequence

>Length 557
MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE
CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCEEEEEEHHHCCCCCCCCHHHHCCCEEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCEEEEEEHHHCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHCCCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHCHHHHHHHHCCCCCEEEEEEEEEECCEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCEEEEEECHHCCCHHHHHHHHCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHHCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEEEEHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE
45320131022014323243021020100102321000001130300000320332323231322220100011123320200002332332201210241243221020101121320000102001000001212133233123133220201002013443201012321122112222321232133021020102201320000001102000001201233132023104222201010020134422000002422332221013313312202010010132000010232020001002022233322123104212202000010134432000001303221122013214322202010110131000010231020000002012322132023204322201010020124432000001412322122012203312102020110222000010231020001012014332321221032122020100101343310000013323232331123134333242213001200232435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE
1	PROSPECT2	3k4xA	0.107	0.919	1.939	threading_1	LESLFKRIIDGF--------KDCVQLVNFQCKEDGIIARCDHPVTLGMDLTSLGNNTDTLTLIADNTPDSIILLFEDTKKEYSLKLMDIDADSEFSKIVRDLSQSDSINIMIT---KETIKFVADGDIGSGSVIIKPFVDMEHPETS--------IKLEMDQPVDLTFGAKYLLDIIKGSSLSDRIRLSSEAPALSGFLQFFLAPKLEAKFEEVSLEIGVEAFQEYRCDHPSKILRCGNNTDTLTLIADNTPDSIILLFEDTKKDRSKIVRDLSQLSDSINIMITK--ETIKFVADGDIGSGSVIIK-------------PFVDMEHPETSIKLEMDQPVDLTFGAKYL-----LDIIKGSSLSDRVGIRLSSEAPALFQFDLKSGFLQFFLAPKFNLEAKFEEASLFKDCVQLVNFQCKEYRCDHPTLGMDLTSL-----SKILRCGNNTDTLTLIADN-TPDSIILLFEDTAEYSLKLMDIDADFLKIEELQYDLSDSINIMIFVADGDIGSGSVIIKPFVDMEHPETSIKLEMDQPVDLTAKYLLDIIKGSSLK
2	SPARKS	3go5a	0.176	0.438	1.049	threading_2	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNTNLASFIVGLIIDENDRFYFVQKD-GQTYALAKEEGQ-----------HTVGDTVKGFAYT-DKQKLRLT------------TLEVTATQDQFGWGRVTEVRDLGVFVDTGPDKEIVVSLDILPE-----LKELWPKKGDQLYIRLEV--DKKDRIWGLLA--YQEDFQRLARYNNQNQNWPAIVYRLKLSGTFVYLPENNLGFIHPSERYAE--------PRLGQVLDARVIGFREVDRTLNLSLKPRELENDAQILTYLESNGGFTLNDKSSPDDIKATFGI
3	HHPRED-l	3aev_A	0.115	0.266	2.083	threading_3	---------------EYPEEGEFVVATVKRIHNYGAFLELDPGKEAFMHISEVASTNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQR-KAKLQEFKRAQKAENLLRLAREVWVPLEWGEVAAFED---AAK---------DGIE-------------VLKGHVPDEWL---PVLKEIVENYVEVP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	3go5A	0.179	0.472	2.447	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQH----------TVGDTVKGFAY-TDKQKLRLTTLEVTATQDQF------------GWGRVTEVRDLGVFVDTGPDKEIVVSLDILPE-----LKELWPKKGDQLYIRLE--VDKKDRIWGLLAYQEDFQRLARPAYNNQNQNWPAIVYRLKLSGTFVYLPENNLGFIHPSERYAE---------PRLGQVLDARVIGFREVDRTLNLSLKPRSFELEN----------------------------DAQI-----LTYLESNGG------FTLND------------------------KSSPDDIKATFGIS------KGQFKKALGGLKAG
5	SAM-T99	3bzkA	0.247	0.415	2.454	threading_5	-ARSLDAVVEDCVNA--------------------VGVDVNTASAALLARISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNETYPLVQRIAADTERDIRSLI-GDSAFLKR----LDPKKFTDETFGLPTVTDILKELDKPGR---DPRPEFKTAEFQEGVESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PPA-I	3go5A	0.171	0.442	2.953	threading_6	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNTNLASFIVGLIIDENDRFYFVQKD-GQTYALAKEEGQH-----------TVGDTVKGFAYTDK--QKLRLTTLEV-----------TATQDQFGWGRVTEVRDLGVFVDTLPDKEIVVSLDILPELKELW-----PKKGDQLYIRLEVDK--KDRIWGLLAYQEDFQRLARPAYNNQNQNWPAIVYRLKLSGTFVYLPENNLGFIHPSERYAE--------PRLGQVLDARVIGFREVDRTLNLSLKPRELENDAQILTYLESNGGFTLNDKSSPDDIKATFGI
7	PROSPECT2	3bdlA	0.120	0.822	1.663	threading_7	MD-------------------KQFVAKVMQVLNDAIVVKLNSGDYKTINTQDKNKKLRPLYDIIGKKVNVTVDYIRPASPATETVPAF----------------SERTCATVTI---GGINIAEKGLATVIRYRQDDDQRSSHYDELLANGKGLHSKKEVPIHRVADISGDT-------QKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLP----------------------KETCLITFLLAGIECPRGARNLPGLVQEGEPFTLFTKELVLQREVEVEVESMDKAGNFI-------GWLHIDGANL------SVLLVEHALSKVHFTAERSSYYKSLLSAEEAAKQKKEKVWAMPVLEEKERSASYKPVF---VTEITDDLHFYVQDVETGTQSHPPVEGSYAPRRGEFCRARVEKVESPANREVLPSTRLGTLS-PAFSTRVLPAQATEYAF-------AFIQVPQD-------DDARTDAVDSVVRDIQ-NTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEMVEVRKEKQFQKVITEYLNAQESA
8	HHPRED-l	3go5_A	0.197	0.427	3.592	threading_8	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NT-NLASFIVGLIIDENDRFYFVQKD-GQTYALAKEEGQH-----------TVGDTVKGFAY-TD-KQK-LRLTTLE----V------TATQDQFGWGRVTEVRKDGVFVDTGLPKEIVVSLDILPELK-----ELWPKKGDQLYIRL-EVDK-KDRIWGLLAY--QEDFQRPAYNN-QNQNWPAIVYRLKLSGTFVLPENN-LGFIHPSERYA--------EPRLGQVLDARVIGFREVDRTLNLSLKPRSLENDAQ-ILTYLESNGGFSSPKALGGL-KAGKI-
9	MUSTER	3go5A	0.177	0.476	0.964	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQH----------TVGDTVKGFAYTD--KQKLRLTTLEVT-----------ATQDQFGWGRVTEVRDLGVFVDTGPDKEIVVSLDILPELKEL-----WPKKGDQLYIRLEVD--KKDRIWGLLAYQEDFQRLARPAYNNQNQNWPAIVYRLKLSGTFVYLPENNLGFIHPSERY---------AEPRLGQVLDARVIGFREVDRTLNLSLKPRSFE--AQILTYLE------------SNGGF---LNDKSS--I-TFGISKGQFKKALGGLKAGK--------IKQDQFGTELI---------------------------------------
10	HHPRED-g	3go5_A	0.187	0.461	3.291	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQ--------H--TVGDTVKGFAY-TD-KQ-KLRLTT----LEVT------ATQDQFGWGRVTEVRKDGVFVDTGLPKEIVVSLDILPEL-----KELWPKKGDQLYIRL-EVDK-KDRIWGLLAY--QEDFQRPAYNN-QNQNWPAIVYRLKLSGTFVLPENN-LGFIHPSERYA---------EPRLGQVLDARVIGFREVDRTLNLSLKPRSFENDAQ-IL---------------------------------------TYLESNGGF-TLND----------------------KSS---PDDIKATF-GISKGQFKKALGGL-KAGKIK

Predicted Tertiary Structure


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TM-score=0.412 to 1k3rB SCOP code=b.40.4.10	TM-score=0.457 to 1vyjG SCOP code=d.131.1.2	TM-score=0.618 to 1npeA SCOP code=b.68.5.1	TM-score=0.414 to 1uebA SCOP code=b.34.5.2	TM-score=0.458 to 1q46A SCOP code=a.60.14.1