Template-based Modeling Results for RPPH_ECOLI

Submitted Primary Sequence

>Length 176
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
CCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEECCCCCCEEEECCCCEEECCCEEEEEEEEECCCHHCCCCCCCCCEEEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
55333212000000001431100001112330020031101323102200122003302122210200000231121312321011213110113211000000112223022322221100100001021003200211130022003100200221233233333222243445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
1	MUSTER	2kdwA	0.994	0.932	3.997	threading_1	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRALFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
2	SPARKS	2kdva	1.000	0.932	4.501	threading_2	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
3	PROSPECT2	2kdvA	1.000	0.932	3.387	threading_3	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
4	PPA-I	2kdwA	0.994	0.932	4.839	threading_4	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRALFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
5	HHPRED-l	1f3y_A	0.335	0.881	2.735	threading_5	DSPPEGYRRNVGICLMNNDKKIFAASRLDPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPHL---------------------
6	HHPRED-g	1f3y_A	0.366	0.869	3.280	threading_6	DSPPEGYRRNVGICLMNNDKKIFAASRLDIDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVP--YWLTYDFPPKVLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPHL---------------------
7	SP3	2kdva	1.000	0.932	4.224	threading_7	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
8	SAM-T99	2kdwA	0.994	0.932	4.791	threading_8	MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRALFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPK------------
9	MUSTER	1f3yA	0.379	0.869	3.100	threading_9	MSPPEGYRRNVGICLMNNDKKIFAASRLDPDAWQMPQGGIDEGEDPRNAAIRELREETGVTS--AEVIAEVPYWLTYDFPPKVLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPHL---------------------
10	SPARKS	1jkna	0.379	0.869	3.395	threading_10	MDSPEGYRRNVGICLMNNDKKIFAASRLDPDAWQMPQGGIDEGEDPRNAAIRELREETGVT--SAEVIAEVPYWLTYDFPPKVREKQWGSDWKGQAQKWFLFKFTGQDQEINLDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPHL---------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.748 to 1f3yA SCOP code=d.113.1.1	TM-score=0.748 to 1f3yA SCOP code=d.113.1.1	TM-score=0.752 to 1f3yA SCOP code=d.113.1.1	TM-score=0.752 to 1f3yA SCOP code=d.113.1.1	TM-score=0.748 to 1f3yA SCOP code=d.113.1.1