Template-based Modeling Results for RP32_ECOLI

Submitted Primary Sequence

>Length 284
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
CCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
45331222022221101100210231210223212200220233222300310020001000200321112101000002200100020033122311010000000001010110004211001010030132011102301341232233213100430212232022011301332011301133323231101011032322222201222212320021023014203330110011110334341102201431211131023013200421232235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
1	MUSTER	3dxjP	0.282	0.937	2.086	threading_1	--------KISTSDPVRQYLHEIGQVPLLTLEEEVELARKVEE-EGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHETINKLSRTARQLQQELG--REPTYEEIAEAMGWDAKRVEETLKIA-QEPVSLETPIGDEKDSFYGD---FIPDEHLP---SPVDAATQSLLSEELEKALSKLSEREAMVLKLRKLIDGREHTLEEVGAFFGVTRERIRQIENKALRKLKYHERT
2	SPARKS	1rp3a	0.228	0.817	5.722	threading_2	--------------------------------------HMKNPYSNQIEREELILKYLPLVKAIATNIKKHDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRS-LDFGSRQVREKERRIKEVVEKLKEKLG--REPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIPSST--------NVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEE---LPAKEVAKILETSVSRVSQLKAKALERLREMLSN
3	PROSPECT2	1rp3A	0.228	0.817	2.598	threading_3	HMKN--------------------------------------PYSNQIEREELILKYLPLVKAIATNIKKHDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYL-RSLDFGSRQVREKERRIKEVVEKLKEKLG--REPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIPSSTN--------VEEEVIKRELTEKVKEAVSKLPEREKLVIQLIF---YEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN
4	PPA-I	3dxjP	0.281	0.940	5.219	threading_4	--------KISTSDPVRQYLHEIGQVPLLTLEEEVELARKVEEGEGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPMVETINKLSRTARQLQQELG--REPTYEEIAEAMGWDAKRVEETLKIA-QEPVSLETPIGDEKDSFYGD---FIPDEHLP---SPVDAATQSLLSEELEKALSKLSEREAMVLKLRKLIDGREHTLEEVGAFFGVTRERIRQIENKALRKLKYHESR
5	HHPRED-l	1l9z_H	0.247	0.898	5.716	threading_5	-------------DPVRQYLHEIGQVPLLTLEEEIDLARKVEEREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQELGREPSYEEIAEAMGPGWDAKRVEETKIAQEPVSLETPI----------D--FIP---DENLPSPVEAAAQSLLSEELEKALSKLSEREAMVLKLRKGIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHES-
6	HHPRED-g	1l9z_H	0.281	0.891	5.493	threading_6	-------------DPVRQYLHEIGQVPLLTLEEEIDLARKVEEREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVENKLSRTARQLQQELGRE--PSYEEIAEAMGPGWDAKREETLKIAQEPVSLETPI------------DFIPDENPSPVEAAAQS----LLSEELEKALSKLSEREAMVLKLRKLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESR
7	SP3	1rp3a	0.233	0.817	5.611	threading_7	-------------------------------------HMKN-PYSNQIEREELILKYLPLVKAIATNIKKHDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRS-LDFGSRQVREKERRIKEVVEKLKEKLG--REPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSE---LIPSST-----NVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEE---LPAKEVAKILETSVSRVSQLKAKALERLREMLSN
8	SAM-T99	3iydF	0.250	0.887	6.639	threading_8	-------------------LQQIEEETGLTIEQVKDINRR-MSIGERRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKV-LKIAKEPISMETPIGDDEDSHLGDFIEDTTLELP------LDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMTDHTLEEVGKQFDVTRERIRQIEAKALRKLR-----
9	MUSTER	1rp3A	0.226	0.810	2.082	threading_9	---------------------------------------HMKPYSNQIEREELILKYLPLVKAIATNIKKHDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSL-DFGSRQVREKERRIKEVVEKLKEKLG--REPTDEEVAKELGISTEELFKTLDKINFSYLSLEEVFRDFARD----YSELIPSST-----NVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIF---YEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN
10	SPARKS	1iw7f	0.241	0.951	5.627	threading_10	GSARVRHIPGLKETLDPKTVEEIDQKLKSLPKEHKRYLHIARE--GEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRVHMVETINKLSRTARQLQQELG--REPTYEEIAEAMGPGDAKRVEETLKIAQEPVSLETPIGDEKDSFYGD---FIPDEHLP---SPVDAATQSLLSEELEKALSKLSEREAMVLKLRKGLI----DGEEVGAFFGVTRERIRQIENKALRKLKYHESR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.482 to 1or7A SCOP code=a.4.13.2	TM-score=0.480 to 1or7A SCOP code=a.4.13.2	TM-score=0.866 to 1rp3A SCOP code=a.4.13.1	TM-score=0.818 to 1rp3A SCOP code=a.4.13.1	TM-score=0.484 to 1or7A SCOP code=a.4.13.2