Template-based Modeling Results for RNFG_ECOLI

Submitted Primary Sequence

>Length 206
MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHCCCCHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE
42320221000000000000000000221022101221123122102310123312312120022121331242322001022343200000101132012110100000123020100200223212100330222123002202233022233232223432210000000000030012002300210220122124132124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE
1	MUSTER	3lwxA	0.218	0.869	2.056	threading_1	SLRSFQKQNEDNDKRQQILRSI-------------NVSSSEAETKYNELIKEAFLVNEVEGDAFATDVVKAATHQYPVFVANVDGQPKYIALHG---AGLWGPLWGYISVDSDKTIYGADFSHQGETPGLGAEIS--KPVFSNEFKGKKIFSGEFKSVAVVKPGDYVDGISGGTITSKGVDELFNSLSGYVKFLTSQ---------
2	SPARKS	3lwxa	0.210	0.811	1.995	threading_2	--------------------------GQSLRSFQKQNEDNDKRQQILRSINVNVSSSEAETKYNELVVKAATEHQYPVFVANVDGQPKYI---ALHGAGLWGPLWGYISVDSDKTIYGADFSHQGETPGLGAEIS--KPVFSNEFKGKKIFSGEFKSVAVVKPGDYVDGISGGTITSKGVDELFNSLSGY----VKFLTSQN----
3	PROSPECT2	3lwxA	0.214	0.908	2.229	threading_3	SLRSFQKQNEDNDKRQQI---LRSINVNVSSSEAETKYNELIKEAFLVNENGEKVEGDAFATDV---VKAATEHQYPVFVANVDGQPKYIALHGA---GLWGPLWGYISVDSDKTIYGADFSHQGETPGLGAEIS--KPVFSNEFKGKKIFSGEFKSVAVVKPGKSVDGISGGTITSKGVDELFNSLSGYVKFLT--------SQN
4	PPA-I	3lwxA	0.192	0.811	2.522	threading_4	--------------------------GQSLRSFQKQNEDNDKRQQILRSINVNVSSSEAETKYNEDVVKAATEHQYPVFVANVDGQPKYIALHG---AGLWGPLWGYISVDSDKTIYGADFSHQGETPGLGAEI--SKPVFSNEFKGKKIFSGEFKSVKSVAGQDYVDGISGGTITSKGVDELFNSLSGYVKFLTSQN--------
5	HHPRED-l	3dcz_A	0.193	0.655	7.198	threading_5	-------------------------------------DNAAKLSAIKFVLKDPLTGDYLV-DEKEIEEIVKTGIETVVLKEYKEGVVLGPLYEFGYAPGFG-NVTVVACKTEDG-LNSVRVIDYSE-------------SIQRRFFPVPPEGLK-NGLRVDKDAGLPDV------TPRAVVTALNL-YRYLEEVSK----------
6	HHPRED-g	3dcz_A	0.185	0.655	7.995	threading_6	-------------------------------------DNAAKLSAIKFVLKDPLTGDY-LVDEKEIEEIVKKGIETVVLKEYKEGVVLGPLYEFGYAPGFG-NVTVVACKTEDG-LNSVRVIDYSE-------------SIQRRFFPVPPEGLK-NGLRVDKDAGLPDV------TPRAVVTALNL-YRYLEEVSK----------
7	SP3	3lwxa	0.214	0.908	1.352	threading_7	SLRSFQKQNEDNDKRQQILRS--INVNVSSSEAETKYNELIKEAFLVNENGEKVEGDAFATDVV----KAATEHQYPVFVANVDGQPKYIA---LHGAGLWGPLWGYISVDSDKTIYGADFSHQGETPGLGAEIS--KPVFSNEFKGKKIFSGEFKSVAVVKPGDYVDGISGGTITSKGVDELFNSLSGY----VKFLTSQN----
8	SAM-T99	3lwxA	0.226	0.772	3.617	threading_8	--------------------------GQSLRSFQKQNEDNDKRQQILAFLVN--ENGEKVEGDAFATDVAATEHQYPVFVANVDGQPK--YIALHGA-GLWGPLWGYISVDSDNTIYGADFSHQGETPGLGAEIS--KPVFSNEFKGKKIFSGEFKSVAVVKPGDYVDGISGGTITSKGVDELFNSLSGYVK--------------
9	MUSTER	3dczA	0.130	0.748	0.716	threading_9	-------------------------------------DNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVLGPLYEFVTKDGFGNVTVVACFIKTEGFLNSVRVIDYSES--IQRRFFPVPPEGLKN--GLRVDKDAGLPKGSPEELKKQGIVKVSDVTPRAVVTALNLYRYLEEVSK-----------
10	SPARKS	3dcza	0.135	0.752	0.707	threading_10	-------------------------------------DNAAKLSAIKFVLKDPLTGDYLVDEKEIEEIVKKTGIETVVLKEYKEGVVLGPLYEFVTKDGRFGNVTVVACFTEDGFLNSVRVIDYSQE-SIQRRFFPVPPEGLKN--GLRVDKDAGLPKGSPEELKKQGIVKVSDVTPRAVVTALNL-YRYLEEVSK----------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.515 to 1vqzA SCOP code=d.224.1.3	TM-score=0.512 to 1vqzA SCOP code=d.224.1.3	TM-score=0.505 to 1vqzA SCOP code=d.224.1.3	TM-score=0.515 to 1vqzA SCOP code=d.224.1.3	TM-score=0.509 to 1vqzA SCOP code=d.224.1.3