Template-based Modeling Results for RNFB_ECOLI

Submitted Primary Sequence

>Length 192
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCHHHHHCCHHHEEECCCCCEEECHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
443101000000000000000000013202023130022023002302012011100200020012323302300100320012002112132322113122221031000013320210120020012300102341112001210210110022012300101212331322313232022321223445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
1	MUSTER	1h7wD1	0.257	0.870	1.122	threading_1	VDLVDFTVIQDYCTGLKALLYLKSIEELWD-GQSPGTESHQKGKPVPELMGKKLPNFGPYLEQRKK-----------IIAEEKMRLKEQNAAFPPLERKPFIPKKPIVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRT---------TPYEPKRGLPL----
2	SPARKS	1gtea5	0.216	0.797	1.977	threading_2	------------------------ELQGWDGQSPGTESHQKGVPRIAELMGKKLPNFKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEPKRGL---------------
3	PROSPECT2	1gtea5	0.226	0.807	2.165	threading_3	ELQ----------------------GWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEP---------------KRGL
4	PPA-I	2vkrA	0.200	0.495	1.620	threading_4	------------------------------------------------------------------------GIDPNYRTSRQVVGEHQGHKVYGPVDPPKVLGIHGTIVGVDFDLCIADGSCITACPVNVFQWYDTPGDPINEQACIFCMACVNVCPVAAIDVKPP-------------------------
5	HHPRED-l	1gte_A	0.256	0.917	2.643	threading_5	VTD-IVSIARAAKEGGADGVTATVSGTPWAVGGTPAVTTIARALPGFPIATGGIDSAESGLQFLHSGASVLQVCSAVDFTVIQDYKALLGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTT---------PYEPKRGL------
6	HHPRED-g	1gte_A	0.288	0.885	2.558	threading_6	GTAIRIALRAVTTIARALFLHSGASVLAVQNQDFTVIQDLKALLPGTESHGKKLPNFGPYLEQIAEN-------ERKPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTT-PYEPKRGL--------------
7	SP3	1gtea5	0.216	0.797	1.743	threading_7	------------------------ELQGWDGQSPGTESHQKPVPRIAELMGKKLPNFKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRT---TPYEPKRGL------------
8	SAM-T99	1h7wD	0.356	0.469	2.266	threading_8	---------------------------------------------------------------------------PGTESHQKRIAELMGKKLPNFGPYLEQRKKIIVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMV---------------------------
9	MUSTER	1h7wD	0.213	0.927	1.096	threading_9	SAVQNQDFTVIQDYCTGLKALLYLKSIEWDGQSPGTESH-KPVPRIAELMGKKLPNFKIIAEEKMRAFPPLERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSR---------TTPYEPKRGLPL----
10	SPARKS	1gtea	0.223	0.911	1.807	threading_10	VIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHRIAELMGKKLPNF--GPYLEQRKKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEPKRGL---------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.546 to 2fdnA SCOP code=d.58.1.1	TM-score=0.534 to 1durA SCOP code=d.58.1.1	TM-score=0.514 to 1durA SCOP code=d.58.1.1	TM-score=0.504 to 1durA SCOP code=d.58.1.1	TM-score=0.510 to 1durA SCOP code=d.58.1.1