Template-based Modeling Results for RNC_ECOLI

Submitted Primary Sequence

>Length 226
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEEECEEEEEEEEECCHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
4332103301320212132130021000131122411100110010000000010002202413311003011101203000200320311200210213232212433200010000000000011213001200220022102311323434323220220022333312101012242334322010101020111101010212320111002201331334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
1	MUSTER	1yykA	0.356	0.956	3.604	threading_1	MK--MLEQLEKKLGYTFKDKSLLEKALTHVSYSKKHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIK------RGKINETIIGDVFEALWAAVYIDSGANFTRELFYKLFKEDILSAKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES
2	SPARKS	1o0wa	0.350	0.987	5.218	threading_2	MNRKIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLL--
3	PROSPECT2	1rc7A	0.352	0.956	3.754	threading_3	MK--MLEQLEKKLGYTFKDKSLLEKALTHVSYSKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGK------INETIIGDVFKALWAAVYIDSGANFTRELFYKLFKEDILSIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE--YRTLGEGKSKKEAEQRAAEELIKLLEES
4	PPA-I	1o0wB	0.348	0.991	4.305	threading_4	MNRKIVEEFQKETGINFKNEELLFRALCHSSYDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLLK-
5	HHPRED-l	1o0w_A	0.350	0.987	4.894	threading_5	MNESIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLL--
6	HHPRED-g	1o0w_A	0.350	0.987	4.022	threading_6	MNESIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLL--
7	SP3	1o0wa	0.350	0.987	5.189	threading_7	MNRKIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLL--
8	SAM-T99	1o0wB	0.344	0.978	5.821	threading_8	-ERKIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGK-TIATGKGRTKKEAEKEAARIAYEKL---
9	MUSTER	1o0wB	0.348	0.991	3.590	threading_9	MNRKIVEEFQKETGINFKNEELLFRALCHSSYANESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNG-KTIATGKGRTKKEAEKEAARIAYEKLLK-
10	SPARKS	3c4ba	0.271	0.947	4.369	threading_10	LNHLGFETFEKKINYRFKNKAYLLQAFTHASYHYNDYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELKNEEDIEVPKAGDIFESLAGAIYDSGSLEVVWQVYYP--QPLIEKFSA----NVPRSPVRELLE-----EPETAKFSPAERTYDGKVRVTVEVVGKG-KFKGVGRSYRIAKSAAARRALRSLKAN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.887 to 1yykA SCOP code=a.149.1.1	TM-score=0.950 to 1o0wB SCOP code=a.149.1.1	TM-score=0.947 to 1o0wB SCOP code=a.149.1.1	TM-score=0.788 to 1yykA SCOP code=a.149.1.1	TM-score=0.955 to 1o0wB SCOP code=a.149.1.1