Template-based Modeling Results for RLUC_ECOLI

Submitted Primary Sequence

>Length 319
MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCHHHHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR
5543332111010223322210020022204200310012004311010242203332303211101011232234333222232332220211000112200000101100000011011000100000133242110000013300000000123200310131035321211000001021434221020101312232211001015402200010100231220000100012121100000011010000013311243123201200220321000000020201112110202030140033002313425
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR
1	MUSTER	2istA	0.302	0.944	3.597	threading_1	----AQRVLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCKPKEKVLGGEQVAINA---EIERFEP--------QDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGVLNALLHYYPPVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADF
2	PPA-I	2istA	0.295	0.947	10.279	threading_2	---AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCKPKEKVLGGEQVAINAEIER-----------FEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGVLNALLHYYPPVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADF
3	SAM-T99	2istA	0.293	0.922	7.150	threading_3	--------LTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCKPKEKVLGGEQVAI-----------NAEIERFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVH--PMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMR---
4	SPARKS	1v9ka	0.959	0.696	5.566	threading_4	---------------------------------------------------------------------------------------------DVIYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREK-GQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGE-VRIEAP-DEGLKRCLQKRNAR-
5	PROSPECT2	1v9kA	0.968	0.696	3.700	threading_5	---------------------------------------------------------------------------------------------DVIYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREK-GQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGE-VRIEAP-DEGLKRCLQKRN-AR
6	SPARKS	1kska	0.242	0.712	3.044	threading_6	-----------------GSHRLDKFIAQQL-GVSRAIAGREIRGNRVTVDGEIVRAAFKLLPEHDVAYDGNPLAQQH----------------------GPRYFLNKPQGYVCSTDDPDHPTVLYFLD--EPVAWKLHAAGRLDIDTTGLVLTDDGQWSHRITSPR---HHCEKTYLVTLESPVADDT-----------AEQFAKGV--QLHNEKDLTKPAVLEVITP-TQVRLTISEGRYHQVK-RFAAVGNHVVELHRIGGITLDADLAP----------------------GEYRPLT---EEEIASVV-------
7	HHPRED-l	1v9f_A	0.300	0.721	6.967	threading_7	-------------------------------------------------------------------------------------FEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTA-GGTVDEPISRHPTKRT--HMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRAD-
8	PROSPECT2	1vioA	0.188	0.718	2.880	threading_8	------------------SLRLDKFIAENV-GLTRSQATKAIRQSAVKINGEIVKGSVQISQEDEIYFED---------------------ELLTWIEEGQYFMLNKPQGCVCSNDDYPTIYQF----FDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRI--TSPKHHCEKTYLVTLADPVEENYSA-------------ACAEGILLRGEKEPTKPAKLEILDD-YNVNLTISEGRYHQVKRMFAALGNKVVGLHRWK-------------------IGDVVLDESLE-EGEYRPLTQ----------SEIEKLV
9	HHPRED-g	1v9f_A	0.307	0.724	6.072	threading_9	-------------------------------------------------------------------------------------FEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVNALLHYYPPIPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRT--HMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRSEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADF
10	HHPRED-l	1vio_A	0.203	0.712	4.027	threading_10	------------------SLRLDKFIAENV-GLTRSQATKAIRQSAVKINGEIVKGSVQISQEDEIYFEDE---------------------LLTWIEEGQYFMLNKPQGCVCSNDD--YPTIYQFF-DY-PLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSP--KHHCEKTYLVTLADPVEENYSA-------------ACAEGILLRGEKEPTKPAKLEILDDYN-VNLTISEGRYHQVKRMFAALGNKVVGLHRIGDVVLDESL---------------------E-EGEYRPLT---QSEIEKLV-------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.542 to 1vioA TM-score=0.885 to native SCOP code=d.265.1.3	TM-score=0.546 to 1vioA TM-score=0.879 to native SCOP code=d.265.1.3	TM-score=0.547 to 1vioA TM-score=0.886 to native SCOP code=d.265.1.3	TM-score=0.555 to 1vioA TM-score=0.875 to native SCOP code=d.265.1.3	TM-score=0.561 to 1vioA TM-score=0.963 to native SCOP code=d.265.1.3

Experimental Structure

Download 1xpiA

SCOP code=d.265.1.3