Template-based Modeling Results for RLUB_ECOLI

Submitted Primary Sequence

>Length 291
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG
CCHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCEECCCCCEECCCCCCEEEECCEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHEECCCCCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCEECCEEEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEECEECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG
453201210140110012102100421102021200311220222331202022110224432332000000010201001231342231000103413221000002012312000000010200120101333122200020224133210210131020221200111020123432321000002313221022003302020020000100102014203411012022210210231032333222322234344424233244223432322224422243445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG
1	MUSTER	3dh3B	0.318	0.821	3.743	threading_1	SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVK--PGDVVKVNGQLIEPREAED--LVLIALNKPVGIVSTTEDG-ERDNIVDFVN--HSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEA----PFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSL-SGIPLGEWRDLTDDELIDLFKLIENSSSEV----------------------------------------
2	SPARKS	1kska	0.294	0.784	4.640	threading_2	GSHRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRN-AAFKLLPEHDVAYDGNPLAQQHGPRYF-----LNKPQGYVCSTDDP-DHPTVLYFLDEPVAWKLHAAGRLDIDTTGLV-LTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNELTKPAVLEVIT----PTQVRLTISEGRYHQVKRFA-AVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV--------------------------------------------------
3	PROSPECT2	1vioA	0.253	0.787	4.399	threading_3	-SLRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVSGSVQISQ--EDEIYFEDELLTWIEEGQ----YFMLNKPQGCVCSNDDYPTIYQF---FDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEI--LDDYNVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKL--------------------------------------------------V
4	PPA-I	3dh3B	0.314	0.821	8.270	threading_4	SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKP--GDVVKVNGQLIEPREAEDLV--LIALNKPVGIVSTTEDG-ERDNIVDFVN--HSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPF----VFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLS-GIPLGEWRDLTDDELIDLFKLIENSSSEV----------------------------------------
5	HHPRED-l	3dh3_A	0.305	0.821	5.708	threading_5	SSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPG--DVVKVNGQLIEP--REAEDLVLIALNKPVGIVSTTEDGE-RDNIVDFVNH--SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEA----PFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLS-GIPLGEWRDLTDDELIDLFKLIENSSSEV----------------------------------------
6	HHPRED-g	2gml_A	0.302	0.591	5.555	threading_6	---------------------------------------------------------------DLV--LIALNKPVGIVSTTEDGE-RDNIVDFVNHS--KRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRG-SAGVPILGTVTKKCKVKK----EAPFVFRITLVQGLNRQIRR-CEHFGYEVKKLERTRI-NVSLS-GIPLGEWRDLTDDELIDLFKLIENSS-------------------------------------------
7	SP3	1kska	0.291	0.780	4.825	threading_7	GSHRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVNAAFKLLP--EHDVAYDGNPLAQQHGP-----RYFLNKPQGYVCSTDDP-DHPTVLYFLDEPVAWKLHAAGRLDIDTTGLV-LTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNELTKPAVLEVIT----PTQVRLTISEGRYHQVKRFA-AVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV--------------------------------------------------
8	SAM-T99	3dh3B	0.312	0.794	5.653	threading_8	-SVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPG--DVVKVNGQLIEP--REAEDLVLIALNKPVGIVSTTEDGE-RDNIVDFV--NHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVK----KEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLS-GIPLGEWRDLTDDELIDLFKLI-----------------------------------------------
9	MUSTER	1vioA	0.276	0.784	3.399	threading_9	-SLRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGS-VQISQEDEIYFEDELLTWIEEG----QYFMLNKPQGCVCSNDD---YPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLEKEPTKPAKLEILDDY----NVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLV--------------------------------------------------
10	SPARKS	2olwa	0.370	0.567	3.589	threading_10	----------------------------------------------------------------QPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPV---QGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLD-NLANGEWREVT----------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.714 to 1vioA SCOP code=d.265.1.3	TM-score=0.717 to 1vioA SCOP code=d.265.1.3	TM-score=0.779 to 1kslA SCOP code=d.265.1.3	TM-score=0.852 to 1vioA SCOP code=d.265.1.3	TM-score=0.719 to 1vioA SCOP code=d.265.1.3