Template-based Modeling Results for RLMI_ECOLI

Submitted Primary Sequence

>Length 396
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
CCEEEEECCHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCEEEECCCCCCCEEEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
441102023231200343000001000231323122020010112312100100012212000000113322211111002102201210221143321200000002132010000010030000101120022112100100120123100012231223232223222100213233221102210020000022123111112111011001210322100000101000000002110110000110330010022003214032220100110012003103432330000001013123232301100300220011002004320000000011202231012000200341212010022132121120012123121010000102
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
1	MUSTER	3c0kA	0.982	0.975	3.075	threading_1	-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF-DVIVDPPKFVENKSQ-LGACRGYKDIN-LAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
2	SPARKS	3c0ka	0.982	0.975	6.139	threading_2	-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGEL-TQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFD-VIVDPPKFVENKSQL-GACRGYKDI-NLAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
3	PROSPECT2	3c0kA	0.959	0.975	5.343	threading_3	-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPAL-LPIEEHGKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR-GEKFDVIVDPPKFVENKSQL-GACRGYKDIN-LAIQLLNEGGILLTFSCSG-LTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACR-V
4	PPA-I	2cwwB	0.369	0.965	3.928	threading_4	--MRIQVNAKGAARLLSRHLWVFRRDVVSGPETP----GLYPVYWGRRFLALALYNPHTDLAVRAYRFAPAED-PVAALLENLAQALARREAVLRQDPEGGYRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQ--SVLAKNDARTRELEGLPLYVRPLLGEVP-ERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMER-FRGERALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLG--NVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL
5	HHPRED-l	2b78_A	0.240	0.947	4.469	threading_5	MI-KLMVGSFAEKKLKRGVQLLSSRDYPNL---NLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPNFLGAYEKI----RF----NVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNEINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF-----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYL--DLQQLPSDFAVNVQDESSNYLKVFTIKV-
6	HHPRED-g	2b78_A	0.241	0.944	4.971	threading_6	-MIKLMVGSFAEKKLKRGVQLLSSRDYPNLN---LDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPFLGAYEKI-----RF----NVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNEINGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF-----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL--QQLPSDFAVNVQDESSNYLKVFTIKV-
7	SP3	3c0ka	0.972	0.975	6.341	threading_7	-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGE-LTQGPVTGELPPALLPI-EEHGKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSAL-GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFD-VIVDPPKFVENKSQLG-ACRGYKDI-NLAIQLLNEGGILLTFSCS-GLTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
8	SAM-T99	3c0kA	0.992	0.975	5.936	threading_8	-SVRLVLAKGREKSLLRRHPWVFSGAVAR-EGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEG-ELTQGPVTGELPPALLPIEEHG-KLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSA-LGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV-DPPKFVENKSQL-GACRGYKDIN-LAIQLLNEGGILLTFSCSGLTS-DLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV-
9	MUSTER	2cwwB	0.366	0.965	3.024	threading_9	M--RIQVNAKGAARLLSRHLWVFRRDVVSGPET---PGLYPVY-WGRRFLALALYNPHTDLAVRAYRFAP-AEDPVAALLENLAQALARREAVLRQDPEGGYRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQ--SVLAKNDARTRELEGLPLYVRPLLGEVPER-VQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMER-FRGERALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGL--GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL
10	SPARKS	2b78a	0.243	0.944	6.004	threading_10	-MIKLMVGSFAEKKLKRGVQLLSSRDYPNLNL---DNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPK-KVSLNVTYFIKLFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGVTIDCYGDFVLFSWYNSFVYQIRDEIVAAFRQVYPFLGAYEKIRFNVS---------AHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNELNGSAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFE-----VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGF--GKQKHTYLDLQQLPSDFAVNVQDESSNYLKVFTIKV-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.905 to 2as0A TM-score=0.996 to native SCOP code=b.122.1.9	TM-score=0.907 to 2as0A TM-score=0.997 to native SCOP code=b.122.1.9	TM-score=0.910 to 2as0A TM-score=0.997 to native SCOP code=b.122.1.9	TM-score=0.907 to 2as0A TM-score=0.997 to native SCOP code=b.122.1.9	TM-score=0.980 to 2cwwB TM-score=0.889 to native SCOP code=b.122.1.9

Experimental Structure

Download 3c0kA

SCOP code=b.122.1.9