Template-based Modeling Results for RLMH_ECOLI

Submitted Primary Sequence

>Length 155
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
CEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
21010001013224102200220032034302010021322451432312210231022002202311000013313323122002002303322310000000120012201210221000020210100000000100010000123222244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
1	MUSTER	1ns5B	0.980	0.974	3.740	threading_1	-KLQLVAVGT-KPDWVQTGFTEYLRRFPKD-PFELIEIPAGKRGKNADIKRILDKEGEQLA-AAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
2	SPARKS	1vh0a	0.309	0.981	5.154	threading_2	LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENKEIEQVKEKEGQRILAKIKPQTVITLEIQGKMLSSEGLAQELNQRMTQGSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY---
3	PROSPECT2	1vh0A	0.309	0.981	3.222	threading_3	LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENKEIEQVKEKEGQRILAKIKPQTVITLEIQGKMLSSEGLAQELNQRMTQGSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY---
4	PPA-I	1ns5B	0.980	0.974	4.187	threading_4	-KLQLVAVGT-KPDWVQTGFTEYLRRFPKD-PFELIEIPAGKRGKNADIKRILDKEGEQLAAA-GKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
5	HHPRED-l	1ns5_A	1.000	0.961	6.689	threading_5	-KLQLVAVGTK-PDWVQTGFTEYLRRFPKD-PFELIEIPAGKRGKNADIKRILDKEGEQ-LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYH--
6	HHPRED-g	1ns5_A	1.000	0.961	5.630	threading_6	-KLQLVAVGTK-PDWVQTGFTEYLRRFPKD-PFELIEIPAGKRGKNADIKRILDKEGEQ-LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYH--
7	SP3	1vh0a	0.309	0.981	5.079	threading_7	LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENKEIEQVKEKEGQRILAKIPQSTVITLEIQGKMLSSEGLAQELNQRMTQGSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY---
8	SAM-T99	1vh0A	0.303	0.981	5.515	threading_8	LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSIEQVKEKEGQRILAKIPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY---
9	MUSTER	1vh0A	0.309	0.981	3.640	threading_9	LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSIEQVKEKEGQRILAKIPQSTVITLEIQGKMLSSEGLAQELNQRMTQGSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY---
10	SPARKS	1ns5a	0.980	0.961	5.025	threading_10	-KLQLVAVGT-KPDWVQTGFTEYLRRFPKD-PFELIEIPAGKRGKNADIKRILDKEGEQLAAA-GKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYH--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.982 to 1ns5B TM-score=0.995 to native SCOP code=c.116.1.3	TM-score=0.980 to 1ns5B TM-score=0.992 to native SCOP code=c.116.1.3	TM-score=0.965 to 1vh0A TM-score=0.923 to native SCOP code=c.116.1.3	TM-score=0.965 to 1vh0A TM-score=0.923 to native SCOP code=c.116.1.3	TM-score=0.980 to 1ns5B TM-score=0.992 to native SCOP code=c.116.1.3

Experimental Structure

Download 1ns5B

SCOP code=c.116.1.3