Template-based Modeling Results for RLMG_ECOLI

Submitted Primary Sequence

>Length 378
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
CCCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
552120122201011012333222131120001000210221333010000012111000001413110000000011001210331213322021121223123301000010031121012002001400223010000021331220012003300222222222220000001123341242211020203213010101020114211210020003202332412000000000000000013023020000010210000011003212232221000001200221432200000000101333211220012002102400433010000002213113103310020110122330100201223457
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
1	MUSTER	2pjdA	0.268	0.868	2.411	threading_1	--------------------------AFTPASEVLLRHSDDFE-QSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQGDNARFS------LVATADDVADCDTLIYYWPKNKPEAQFQLNLL-SLLPVGTDIFVVGENRSGVRSAEQLAD--YAPLNKVDSARRCGLYFGRLKQPVFDAEKFWGEYSVDG--LTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG----EVFASNVFSEVKG-RFD-IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI------
2	SPARKS	2pjda	0.267	0.870	4.989	threading_2	--------------------------AFTPASEVLLRHSDDFE-QSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQ------GDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLNLL-SLLPVGTDIFVVGENRSGVRSAEQLAD--YAPLNKVDSARRCGLYFGRLEKQPVFDAEKFW-GEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE----GEVFASNVFSEVKG-RFD-IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI------
3	PROSPECT2	3dmfA	0.213	0.944	4.113	threading_3	L--TREAYHRLTPLPHPGGRIKPGARGYDPVHDLLQKTVE--PFGERALDLNPGVGWGSLPLEGRMAVERLETS---RAAFRCLTASGLQA---RLALPWEAAAGAYDLVVLALPAGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGYGVVVRREGPYRVALLEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALEGVRGRQVLDLGAGYGALTLPLAR--MGAEVVGVEDDLASVLSLQKGLEANALKA----QALHSDVDEALEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKV-AEYKVLFAEK----R
4	PPA-I	2pjdA	0.261	0.870	3.631	threading_4	--------------------------AFTPASEVLLRHSDDFE-QSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQG------DNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLNLL-SLLPVGTDIFVVGENRSGVRSAEQLAD--YAPLNKVDSARRCGLYFGRLEKQPVFDAEKFW-GEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG----EVFASNVFSEVKGRF--DIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI------
5	HHPRED-l	3dmg_A	0.214	0.926	4.021	threading_5	LTPLPHPGG--RLFIKPGARG---YR--DPVHDLLQKTVEPFG--ERALDLNPGVGWGSLPLERMAVERLETSRAAFR----CLTASGLQ---ARLALPWEAAAGAYDLVVLALPAGRGYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARAYGVVVRREGPYRVALL-EKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQEGVRGQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANALKA----QALHSDVDEALEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQT-LKVAEYKVLFAEKR----
6	HHPRED-g	3dmg_A	0.195	0.934	4.957	threading_6	LTRERLTPLPHPGGRLFIKPGARGYR--DPVHDLLQKTVEPFG--ERALDLNPGVGWGSLPLERMAVERLETSRAAFR----CLTASGLQ---ARLALPWEAAAGAYDLVVLALPAGRGYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARAYGVVVRREGPYRVALL-EKEKEA--PPLPSLWRAFSALGAEYTFHHLPGVFSAGKVDPASLLLLEALQEGVRGQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANALK----AQALHSDVDEALEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQT-LKVAEYKVLFAEKR----
7	SP3	2pjda	0.267	0.870	5.182	threading_7	--------------------------AFTPASEVLLRHSDDFE-QSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQ------GDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLNLL-SLLPVGTDIFVVGENRSGVRSAEQLAD--YAPLNKVDSARRCGLYFGRLEKQPVFDAEKFW-GEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE----GEVFASNVFSEVKG-RFD-IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI------
8	SAM-T99	2pjdA	0.261	0.870	6.183	threading_8	--------------------------AFTPASEVLLRHSDDFE-QSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQGD------NARFSLVATADDVADCDTLIYYWPKNKPEAQFQLN-LLSLLPVGTDIFVVGENRSGVRSAEQLADYA--PLNKVDSARRCGLYFGRLEKQP-VFDAEKFWGEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE----GEVFASNVFSEV-KGRFD-IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAI------
9	MUSTER	2zwvA	0.222	0.929	2.349	threading_9	LTPLPHPGGRLFIK--PGA------RGYDPVHDLLQKTVE--PFGERALDLNPGVGWGSLPLEGRMAVERLET---SRAAFRCLTASGLQ---ARLALPWEAAAGAYDLVVLALPRGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGYGVVVRGPYRVALLEKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALPEGVRGQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKA----QALHSDVDEALTEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKV-AEYKVLFAEK----R
10	SPARKS	3dmfa	0.219	0.931	4.730	threading_10	LTPLPHPGGRLFIK--PGARGYR-----DPVHDLLQKTVEPFG--ERALDLNPGVGWGSLPLEGRMAVERL---ETSRAAFRCLTASGLQ---ARLALPWEAAAGAYDLVVLALPRGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGVVVRREGPYRVALLEKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALPEGVRGRVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALK----AQALHSDVDEALEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLK-VAEYKVLFAEKR----

Predicted Tertiary Structure


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TM-score=0.646 to 1dusA SCOP code=c.66.1.4	TM-score=0.653 to 1dusA SCOP code=c.66.1.4	TM-score=0.652 to 1dusA SCOP code=c.66.1.4	TM-score=0.679 to 1dusA SCOP code=c.66.1.4	TM-score=0.643 to 1dusA SCOP code=c.66.1.4