Template-based Modeling Results for RLMF_ECOLI

Submitted Primary Sequence

>Length 308
MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR
CCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEECCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR
55433322022121314110210030023023000124222100112222002100100001012022231232100010213120020012002311221223111000000010000000132220200001002300100110032122233102021232111012112343210000000011232220032123334331223322111011322100022220100220021021014200000010242320320030023121220110101212220000000012232333123335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR
1	MUSTER	2h00A	0.317	0.727	2.185	threading_1	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDL-IKVVKVPQKTLLMDALKESEIIYDFCMCNPPFFGI-----------------------------TEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
2	SPARKS	2h00a	0.321	0.727	4.416	threading_2	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDL-IKVVKVPQKTLLMDALKEESEIYDFCMCNPPFFGI-----------------------------TEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
3	PROSPECT2	2h00A	0.317	0.727	2.867	threading_3	VS-----------------------------------------LNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTLLMDALKEESEIYDFCMCNPPFFGITEIMAE-----------------------------GGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
4	PPA-I	2h00A	0.321	0.727	3.118	threading_4	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDL-IKVVKVPQKTLLMDALKEESEIYDFCMCNPPFFGI-----------------------------TEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
5	HHPRED-l	2h00_A	0.321	0.727	6.128	threading_5	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTLLMDALKEEEIIYDFCMCNPPFF-----------------------------GITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
6	HHPRED-g	2h00_A	0.321	0.727	8.693	threading_6	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-SDLIKVVKVPQKTLLMDALKEESEIYDFCMCNPPFF-----------------------------GITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
7	SP3	2h00a	0.321	0.727	4.515	threading_7	-----------------------------------------VSLNFKDPEAVRALTCTLLREDFGLS-IDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDL-IKVVKVPQKTLLMDALKEESEIYDFCMCNPPFFGI-----------------------------TEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
8	SAM-T99	2h00A	0.312	0.727	4.892	threading_8	-----------------------------------------VSLNFKDPEAVRALTCTLLREDF-GLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-SDLIKVVKVPQKTLLMDALKEESEIYDFCMCNPPFFGITEIMAEG-----------------------------GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD------------
9	MUSTER	2b3tA	0.150	0.825	1.331	threading_9	MEYQISQLQASESPRR--DAEILLEHVTGRRTFILAFGETQL-----TDEQCQQLDALLTRRR-SLP-LFVSPATLIPR-PDTECLVEQALARL------PEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI--KNIHILQ----SDWFSAL--AGQQFAMIVSNPPYIDEQDPHLQQGDVRF--------------EPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW-QQGEAVRQAFILAGYHDVETCRDYGD-NERVTLGRYY--------------
10	SPARKS	3evza	0.181	0.627	2.324	threading_10	---------------------------------------------FSNRQARILYNKAIAKALFGLD-IEYHPKGLVTTPISRYIFLK----------TFLRGGEVALEIGTGHT---AALAEKFFNCKVTATEVDEEFFEYARRNIERNNS-----NVRLVKSNGGIIKGVV--EGTFDVIFSAPPYYG-----------------------------------GKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLNVIKERGIKLGY-SVKDIKFKVGT---WRHSLIFFKGI----------

Predicted Tertiary Structure


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TM-score=0.853 to 2h00A SCOP code=c.66.1.54	TM-score=0.855 to 2h00A SCOP code=c.66.1.54	TM-score=0.851 to 2h00A SCOP code=c.66.1.54	TM-score=0.841 to 2h00A SCOP code=c.66.1.54	TM-score=0.851 to 2h00A SCOP code=c.66.1.54