Template-based Modeling Results for RIMM_ECOLI

Submitted Primary Sequence

>Length 182
MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF
CCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEECCCCHHHHHCCCEEEECCCCEEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCEEEEEHHHCCCCCCCCEEHHHHCCEEEEECCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF
55432324232100000100201002010100111320300131210002322210201022022333100020220224210131130100011221242332210022001010012322100100001211110000021324322222100000031200220113221020112334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF
1	MUSTER	3h9nA	0.671	0.918	3.340	threading_1	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGY-TGTVTE---TGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
2	SPARKS	3h9na	0.673	0.923	5.714	threading_2	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGY-TGTVTE--ETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
3	PROSPECT2	3h9nA	0.655	0.923	3.357	threading_3	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGYTGTVTEE---TGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
4	PPA-I	3h9nA	0.655	0.923	4.677	threading_4	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGYTGTVTEE---TGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
5	HHPRED-l	2f1l_A	0.379	0.885	6.800	threading_5	-----------DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRDGEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFTGYEICIPRSELPS-----YYWHQLEGLKVIDQGRQLLGVIDHLLETGANDV-VVKPCAG-SLDDRERLLPYTG-QCVLSIDLAAGE-RVDWDAD-
6	HHPRED-g	2f1l_A	0.383	0.890	6.108	threading_6	-----------DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRDGEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFTGYEICIPRSELPS-----YYWHQLEGLKVIDQGRQLLGVIDHLLETGANDV-VVKP-CAGSLDDRERLLPYTG-QCVLSIDLAAGE-RVDWDADF
7	SP3	3h9na	0.673	0.923	5.574	threading_7	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGY-TGTVTE--ETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
8	SAM-T99	3h9nA	0.673	0.923	5.585	threading_8	-----------HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIGVDLSVFPELEEGDYYWHDLIGCTVVNLEGYT-GTVTE--ETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF
9	MUSTER	2f1lA	0.377	0.890	3.272	threading_9	-----------DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRDGEIRQAELVRGRLHGKVLAAKLKGLDDREEARTFTGYEICIPRSELP-----SYYWHQLEGLKVIDQGRQLLGVIDHLLETGANDVVVKPCA--GSLDDRERLLPYTG-QCVLSIDLAAG-ERVDWDADF
10	SPARKS	3a1pa	0.308	0.874	5.523	threading_10	-----------RLVEIGRFGAPYALKGGLRFRGE----PVVLHLERVYVEGHG---WRAIEDLYRVGEELVVHLAGVTDRTLAEALVGLRVYAEVADLPPLEEGRYYYFALIGLPVYV-EGRQVGEVVDILDAGAQDVLIIRGVGERLRDRAERLVPLQAPY----VRVEEGSIHVDPIPGL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.626 to 2f1lA SCOP code=b.41.1.4	TM-score=0.626 to 2f1lA SCOP code=b.41.1.4	TM-score=0.625 to 2f1lA SCOP code=b.41.1.4	TM-score=0.626 to 2f1lA SCOP code=b.41.1.4	TM-score=0.626 to 2f1lA SCOP code=b.41.1.4