Template-based Modeling Results for RIMJ_ECOLI

Submitted Primary Sequence

>Length 194
MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR
CCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEHHHEEECCEEEEEEEEEEEHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR
54213132140202122000120234002200200122331032121133323112200221011012124322100000012333100000000001222120000000002312120001100100020013212010000000221330020034021222000120010311010000000013212335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR
1	MUSTER	3igrA	0.441	0.923	3.440	threading_1	---------DVSFEFEHYQVRLIKSSDAVTIANYFR-NRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNITRFPFHAGHVGYSLDSEYQGKGI-RRAVNVTIDW-FKAQNLHRIAAYI-PRNEKSAKVLAALGFVKEGEAKKYLYINGAWEDHILTSKINDDWKP--
2	SPARKS	3r9ga	0.179	0.923	3.732	threading_2	----DVSLTPSGIKNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAF-VNNISDSVSFIEQSMIDNQNEKALILFIKY--KTKIAGVVSFNIID-HANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI-------
3	PROSPECT2	3r95A	0.189	0.928	3.828	threading_3	DV---SLTPSGIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPA-FVNNISDSVSFIEQSMIDNQNEKALILFIKY--KTKIAGVVSFNII-DHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKV-------I
4	PPA-I	3igrA	0.441	0.923	4.060	threading_4	---------DVSFEFEHYQVRLIKSSDAVTIANYFR-NRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNITRFPFHAGHVGYSLDSEYQGKGI-RRAVNVTIDW-FKAQNLHRIAAYI-PRNEKSAKVLAALGFVKEGEAKKYLYINGAWEDHILTSKINDDWKP--
5	HHPRED-l	2fck_A	0.234	0.881	2.512	threading_5	-------TPDFQIVTQRLQLRLITADEAEELVQCIRQSQTL-HQWVDW-----FSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVG-VAINEFYHT-FN-ASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP-------
6	HHPRED-g	2fck_A	0.240	0.881	2.388	threading_6	-------TPDFQIVTQRLQLRLITADEAEELVQCIRQS-QTLHQWVD-W----FSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVG-VAINEFYH-TFN-ASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP-------
7	SP3	3r9ga	0.179	0.923	3.847	threading_7	----DVSLTPSGIKNDEITLLYPALKYAEELYLLINQNKINFIKSMA-WPAFVNNISDSVSFIEQSMIDNQNEKALILFIKY--KTKIAGVVSFNIIDH-ANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI-------
8	SAM-T99	3igrA	0.441	0.923	3.987	threading_8	---------DVSFEFEHYQVRLIKSSDAVTIANYF-RNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNITRFPFHAGHVGYSLDSEYQGKGI-RRAVNVTIDW-FKAQNLHRIAAYI-PRNEKSAKVLAALGFVKEGEAKKYLYINGAWEDHILTSKINDDWKP--
9	MUSTER	2fckA	0.246	0.881	3.239	threading_9	-------TPDFQIVTQRLQLRLITADEAEELVQCIRQSQ-TLHQWVD-----WFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGVAINEFYHTFN---ASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP-------
10	SPARKS	3r95a	0.179	0.923	3.725	threading_10	----DVSLTPSGIKNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAF-VNNISDSVSFIEQSMIDNQNEKALILFIKY--KTKIAGVVSFNIID-HANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI-------

Predicted Tertiary Structure


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TM-score=0.836 to 1nslC SCOP code=d.108.1.1	TM-score=0.836 to 1nslC SCOP code=d.108.1.1	TM-score=0.872 to 1s7fA SCOP code=d.108.1.1	TM-score=0.871 to 1s7fA SCOP code=d.108.1.1	TM-score=0.836 to 1nslC SCOP code=d.108.1.1