Template-based Modeling Results for RIBF_ECOLI

Submitted Primary Sequence

>Length 313
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA
CEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCEECHHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA
2100201331332233100000010100020020002002310353311000000221011111233222201323210200230202000002113201211122001101132220200000110201112311020023002311010100110122323001200130022120200221111000000200202322221110100021333101230000000001132101000001121102322110100002121212122010001430233331210320122023002102300232334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA
1	MUSTER	2x0kA	0.302	0.994	3.229	threading_1	MDIWYGTAAVPKDLD-NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQ-SRLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGGGKELGFPTANQYFDTVALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQA
2	SPARKS	2x0ka	0.302	0.994	7.543	threading_2	MDIWYGTAAVPKD-LDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQIC-QSRLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGGGKELGFPTANQYFHTVALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQA
3	PROSPECT2	2x0kA	0.302	0.994	6.102	threading_3	MDIWYGTAAVPK-DLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQIC-QSRLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGGGKELGFPTANQYFHDTALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLALQAES
4	PPA-I	2x0kA	0.299	0.994	4.705	threading_4	MDIWYGTAAVPKDL-DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQ-SRLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGGGKELGFPTANQYFHDVALPADGVYAGWLTILPTEAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQA
5	HHPRED-l	2x0k_A	0.300	0.990	6.673	threading_5	MDIWYGTAAVPKDL-DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGKELGFPTANQYFHDTALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQ-
6	HHPRED-g	2x0k_A	0.302	0.994	5.827	threading_6	MDIWYGTAAVPK-DLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGKELGFPTANQYFDTVALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQA
7	SP3	2x0ka	0.302	0.994	7.460	threading_7	MDIWYGTAAVPKD-LDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQ-SRLTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGGGKELGFPTANQYFHDVALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLAQDVQA
8	SAM-T99	2x0kA	0.304	0.978	6.747	threading_8	MDIWYGTAAVPK-DLDNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSR-LTVDVIDLLDDEGVRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGKELGFPTANQYFHTVALPADGVYAGWLTILPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLA-----
9	MUSTER	3op1A	0.295	0.911	2.873	threading_9	IIPIKNQKDIG--TPSDSVVVLGYFDGIHKGHQELFRVANKAARK-DLLPIVVTFNESPKIALEPYHPDLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI--KANAKIIVAGFDYTFGSDKKT----AEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGVV-HGN------GYPTANLVLLDRTYPADGVYVVDVEIQR--QKYRAASVGKNVTFDEA--RFEVNIFDFNQDIYG-ETVVYWLDRIR-DTKFDSVDQLVDQLKADEEVTRNW-S-----
10	SPARKS	3op1a	0.298	0.911	6.148	threading_10	IIPIKNQKDIG--TPSDSVVVLGYFDGIHKGHQELFRVANKAARK-DLLPIVVTFNESPKIALEPYHPDLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI--KANAKIIVAGFDYTFGSDKKT----AEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRG-VVHGN------GYPTANLVLLDRTYPADGVYVVDVEI--QRQKYRAASVGKNVTFDEA--RFEVNIFDFNQDIYGET-VVYWLDRIR-DTKFDSVDQLVDQLKADEEVTRNWS------

Predicted Tertiary Structure


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TM-score=0.837 to 1s4mA SCOP code=b.43.5.1	TM-score=0.836 to 1s4mA SCOP code=b.43.5.1	TM-score=0.836 to 1s4mA SCOP code=b.43.5.1	TM-score=0.831 to 1s4mA SCOP code=b.43.5.1	TM-score=0.831 to 1s4mA SCOP code=b.43.5.1