Template-based Modeling Results for RIBA_ECOLI

Submitted Primary Sequence

>Length 196
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK
CEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK
3112110202020320201000011222221000001021334220001001201001012023020121022001102432200000012323321111102011233333322312332222211210200020041010210000221131032025020200110102133132023001010332122234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK
1	MUSTER	2bz0B	1.000	0.883	4.363	threading_1	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
2	SPARKS	2bz0a	1.000	0.857	4.702	threading_2	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVE-----GFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
3	PROSPECT2	2bz0A	1.000	0.857	4.345	threading_3	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVE-----GFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
4	PPA-I	2bz0B	1.000	0.883	6.295	threading_4	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
5	HHPRED-l	2bz1_A	1.000	0.867	11.551	threading_5	-QLKRVAEAKLPTPWGDFL-VGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCAD-FKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
6	HHPRED-g	2bz1_A	1.000	0.867	10.965	threading_6	-QLKRVAEAKLPTPWGDFL-VGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCAD-FKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
7	SP3	2bz0a	1.000	0.857	2.280	threading_7	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVE-----GFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
8	SAM-T99	2bz0B	1.000	0.883	10.051	threading_8	MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIV-----------------------
9	MUSTER	2jlmD	0.163	0.816	0.628	threading_9	MF---------PSTTTLFRFVE-----TEDQHA-----------LEILEILNDAINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFAS-WGSFRAFPAYKYTVE--HSVYIHKDYRGLGLSKHLMNELEVHVMVG-ATNVASIQLHQKLGFIHSGTIQ---QAGFKFGRWLDA----YQLTLDT
10	SPARKS	1ek1a1	0.125	0.816	0.737	threading_10	------------------RVAAFDALPSIGPTEQLMKGKITFSQWVPLQIFSQAMA-----ARSIN--RPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHDFLIESCQVGMIPEP---QIYNFLLDTLKAKEVVFLDDFGSNLKPARDMGMVT-----ILVHNTASALRELE---KVTGTQFPE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.936 to 2bz0B TM-score=0.994 to native SCOP code=c.144.1.1	TM-score=0.936 to 2bz0B TM-score=0.994 to native SCOP code=c.144.1.1	TM-score=0.921 to 2bz0B TM-score=0.978 to native SCOP code=c.144.1.1	TM-score=0.921 to 2bz0B TM-score=0.978 to native SCOP code=c.144.1.1	TM-score=0.936 to 2bz0B TM-score=0.994 to native SCOP code=c.144.1.1

Experimental Structure

Download 2bz0B

SCOP code=c.144.1.1