Template-based Modeling Results for RHTC_ECOLI

Submitted Primary Sequence

>Length 206
MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
21210000000000000010010010011001211120000000000000000000000001001101100100000000000000000020213332222222323223102000200000010010000000000100133012101000000000000000000000000110120122012001000000000000101124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR
1	SPARKS	1kola	0.159	0.854	1.328	threading_1	LSDILPTGYHGAVTAGVGPG-STVYVA------G--------AG-PVGLAAAASARLLGAAVVIVLNPARLAHAKAQGFEIALHEQIAALLGEPEFEARGHGHEGAKHEAPATVLNSLMQV--TRVAGKIGIPGLYVT--EDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMW--D--------RINIAE
2	PROSPECT2	1t33A	0.090	0.966	1.222	threading_2	MAKSQLIAAALAQFGEYGLHATTRDIAALAITYSKEDLYLACAQWIADFLGEKFRPHAKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVID-----PLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGL--TQ
3	SPARKS	1e3ja	0.113	0.733	1.020	threading_3	LLEPLSVGVHACRRAGVQLG-TTVLVI------G--------AG-PIGLVSVLAAKAYGAFVCTARSPRRLEVAKNCGA----------------DVTLVVDPAKEEESSIIERIRSATIDCSGNEKCITIGINI----TRTGGSQMV-----------TVPLVNACAREIDIKSVFRYCNDYPIALEMVAG--------RCNVKQ
4	PROSPECT2	3ibvA1	0.093	0.995	1.208	threading_4	MVEAALGWKICHEIFSEKTKYKPLQTLSEKVREWELQMIRDSVWSYIKELYISNAVQHLLTLLFLQLASLQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDM-SDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQINLIVNEPCMNLLYSFLQIEELRCAACETMTEIVNNLLNILNLNLFFSK
5	SPARKS	1qora	0.141	0.825	1.002	threading_5	AAASFLKGLTVYYLLRIKPD-EQFLFH------A-------AAG-GVGLIACQWAKALGAKLITVGTAQKAQSALKAGAWQVINYLVERLKEITGGKKVRVVYDSVGRDTWERSLD------CLQRRGLMVSFG-----NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIAS--G--------VIKVDV
6	PROSPECT2	2zcxA	0.133	0.874	1.163	threading_6	QEEAILDAARELGTERGIREITLTDIAATALLRTREQIFLKITAEGWKEWSAELCARLRPDAVGQVFAATLAARPLFCDLLAQAPLN---------------LERNVSVESVRSFKIATL------DEVGRIGAELRRLLGVDETQAVDVIATATSLAGALWQMAIQTLYRSDPRLAHAVVEVEPRLNRVLGALLRGIA-----DG
7	PROSPECT2	2fbqA	0.102	0.908	1.161	threading_7	TVERILDAAEQLFAEKGFAETSLRLITSKAVNYSKKALIQAVFSRFLGPFCASLEKELDRRQLEDLLHLLVSQAMAVGNDLSIFMRLLGLAFSQSQGH------------LRKYLEEVYG------KVFRRYMLLVNEAAPKLPPIELFWRVHFMLGAAAFSMSGIKALRAMAETDFGVNTSTEQVMHLMVPFFAAGMRAE-SGID
8	PROSPECT2	2bkuB2	0.092	1.000	1.159	threading_8	VMDKLLQSNILTVLAAVIRKDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFELETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRAQMISNPNARRELKPAVLSVFIASNIGADFIPYLNDIMALCVPENGTLEALDYQIKVLEAVLDAYVGIVAAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPQKRQLSL
9	MUSTER	4a2nB	0.096	0.859	0.809	threading_9	MLWKICFIVMFIIWVFV-----RKVYGTRAMKRPNFEKSLVFLNFIGMVFLPLTAVFSSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIR--------HPMYAHLWLWVITQG------IILSNWVVLIFGIVAWAILYFIRVPKEEELLIEEFDEYIEYMGKT----------GRLFPK
10	SPARKS	2j8za	0.091	0.796	0.995	threading_10	PEAWLTAFQLLHLVGNVQAG-DYVLIH-------------AGLS-GVGTAAIQLTRMAGAIPLTAGSQKKLQMAEKLGAAAGF--FSEATLKFTKGAGVNLILDCIGGSYWEKNVNC------LALDGRWV-------LYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQI------------LPHFSTQ

Predicted Tertiary Structure


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TM-score=0.736 to 1kolA SCOP code=b.35.1.2	TM-score=0.910 to 1t33A SCOP code=a.4.1.9	TM-score=0.654 to 1qorA SCOP code=b.35.1.2	TM-score=0.635 to 2vglB SCOP code=i.23.1.1	TM-score=0.852 to 1qorA SCOP code=b.35.1.2