Template-based Modeling Results for RHMD_ECOLI


  Submitted Primary Sequence

>Length 401
MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEECHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
56122021010000102223212211201122120001110000012123233233211122000000001033221000100003000100121002002221021032001100101111211200000000000000000004102100020011212220200000122211221012002022212133132102200200120034014301000001010103100200200231202002200112213002201420301020110112011200210022001000000020110010010010032110200000001000000000110100200122220221222122102331112202001101221000010023003422234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
1MUSTER3d47A0.9601.0003.107threading_1MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENRQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHLKRPYSH
2SPARKS2gsha0.9601.0002.755threading_2MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENRQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHLKRPYSH
3PROSPECT22gshA0.9601.0004.776threading_3MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENRQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHLKRPYSH
4PPA-I3d47A0.9601.0003.085threading_4MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENRQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHLKRPYSH
5HHPRED-l3ekg_A0.6360.9382.402threading_5LSIPTIKQVRAFVLRG-------GGADYHDQGDGHWIDDHISTP-GKYPEYRQSRRSFGINVLGTLVVEIEASDGNVGFAVTTGGEPAAYIVEKHLARFLEGARVTDIERIWDQ-YNSTLY-YGRKGLVINTISGVDLALWDLLGKVRREPVHQLLGGAVRDELQFYATGARPDLAQK-GFIGGK-PLHHGPSEGEEGLKKNLEELAT-RERVGPDFWL-FDCW-SLDLNYATRLARGAREYGLKWIEEALPPDDYWGYAELRRNAPTG--VTTGEHEATRWGFR-L--GCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHGSSVYSYHFVATRQNSPFAEFL--APKADQVVP-FHPQLLGEPVPENGR-RLSRLDQPGFGVTLNPECQLHRPYT-
6HHPRED-g3ekg_A0.6390.9402.139threading_6LSIPTIKQVRAFVLRG-------GGADYHDQGDGHWIDDHISTP-GKYPEYRQSRRSFGINVLGTLVVEIEASDGNVGFAVTTGGEPAAYIVEKHLARFLEGARVTDIERIWDQ-YNSTLYY-GRKGLVINTISGVDLALWDLLGKVRREPVHQLLGGAVRDELQFYATGARPDLAQK-GFIGGK-PLHHGPSEGEEGLKKNLEELAT-RERVGPDFWL-FDCW-SLDLNYATRLARGAREYGLKWIEEALPPDDYWGYAELRRNAPTG--VTTGEHEATRWGFR-L--GCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHGSSVYSYHFVATRQNSPFAEFL--APKADQVVP-FHPQLLGEPVPENGR-RLSRLDQPGFGVTLNPECQLHRPYTH
7SP33sqsa0.2730.9332.793threading_7--MTKIKSVRTRVWNWTGPTVPPQGNFCT------NASD--------------ALWIASFRFHQWLTCEVETEDGTIGIGNAALPNVVKQAIDEWYAPLVIGEDPFDYAYLWEKMYRRTHAW-GRKGIGMTAISAIDIAIWDLMGKLVGKPVFKLLGGRTKEKIPVYYSKLYADEAQKHGYQGYKTRFGYGPKDGPAGMRENLKRVEALREVLGYDVDLMLECYMGWNLDYTKRMLPKLERFEPRWLEEPVIADDVAGYAELNAMGIVP--ISGGEHEFSVMGCAELINKAVSVLQYDTNRVGGITAAQKINAIAEAAQIIVIPHAGQMHNYHLTMANMNCPISEYFPVF-DVEVGNELFYYIFDGDPEAVDGYLQL-DDDTPGLGITISDAHLKHFEITE
8SAM-T993rr1A0.2520.8301.944threading_8-----------------------------MVKITRLTTYRLPP--------------------RWMFLKVETDEGVTGWGEPVIEGRTVEAAVHELSDYLIGQDPSRINDLWQTMYRAGFY--RGGPILMSAIAGIDQALWDIKGKVLGVPVYELLGGLVRDKMRTYSWVGGDKALQAGGFDHFKLNGCEEMGIISRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAETYARLAAHTH--LPIAAGERMFSRFDFKRVLEGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHCPLGACLHVDFVSWNATLQEQSMEL--------LDYVRNKADFALEGG--YIRPPRLPGLGVDIDEALVIE-----
9MUSTER3fxgA0.4280.9682.626threading_9KDFPKIKAIRSFIIGGVG-----SGGDYHNVKGGHWLDSDISTPASKWEQYKKSRTSWGINVLGSFLVEIEATDGTVGFATGFGGPPACWLVHQHFERFLIGADPRNTNLLFEQYRAS---FYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGGATKERLDFYCTGPEPTAAKA-GFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGPDFPIVDC--YSLNVSYTIELVKACLDLNINWWEECLSPDDTDGFALIKRAHP-TVKFTTGEHEYSRYGFRKLVERNLDIIQPDV-WLGGLTELLKVAALAAAYDVPVVPHASGPYSYHFQISQPNTPFQEYLANSPDGKSVLPVFGDLFIDEPIPTKGYLTTADLDKPGFGLTINPAARAKLPSDY
10SPARKS3sqsa0.2700.9332.742threading_10--MTKIKSVRTRVWNWTGPTVPPQGNFCTNASD--------------------ALWIASFRFHQWLTCEVETEDGTIGIGNAALPNVVKQAIDEWYAPLVIGEDPFDYAYLWEKMYRRTHA-WGRKGIGMTAISAIDIAIWDLMGKLVGKPVFKLLGGRTKEKIPVYYSKLYADEAQKHGYQGYKTRFGYGPKDGPAGMRENLKRVEALREVLGYDVDLMLECYMGWNLDYTKRMLPKLERFEPRWLEEPVIADDVAGYAELNAMGIVPI--SGGEHEFSVMGCAELINKAVSVLQYDTNRVGGITAAQKINAIAEAAQIIVIPHAGQMHNYHLTMANMNCPISEY-FPVFDVEVGNELFYYIFDGDPEAVDGYLQLD-DDTPGLGITISDAHLKHFEITE

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.843 to 1mnsA
TM-score=0.997 to native
SCOP code=c.1.11.2		 TM-score=0.843 to 1mnsA
TM-score=0.997 to native
SCOP code=c.1.11.2		 TM-score=0.842 to 1mnsA
TM-score=0.996 to native
SCOP code=c.1.11.2		 TM-score=0.842 to 1mnsA
TM-score=0.996 to native
SCOP code=c.1.11.2		 TM-score=0.843 to 1mnsA
TM-score=0.997 to native
SCOP code=c.1.11.2

  Experimental Structure

Download 2i5qB
SCOP code=c.1.11.2