Template-based Modeling Results for RHAR_ECOLI

Submitted Primary Sequence

>Length 282
MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
CCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEEECCEEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
554222023331112321000011211321123100210100001202010003322020240000001032100001143120100000021031113110001001122122212222201110220012012212432210120010000100100121322232223221320021002101310523010220031020022001200132131002200110101101211432322011002201131021001000412310122123223544
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD
1	MUSTER	3gbgA	0.125	0.908	2.455	threading_1	--------KKSF----QTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSDENINVSVITIS--------DSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNSIFITDDLD---AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
2	SPARKS	3gbga	0.122	0.904	3.473	threading_2	-------------KKSFQTNVYRSKFDTYIFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTSDENINVSVITIS--------DSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINY-SDEFLKVFFSGFFSKVEK---KYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
3	PROSPECT2	3gbgA	0.113	0.908	3.968	threading_3	-KKSFQT-----------NVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLLSDENINVSVITISD--------SFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKV----FFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML-TGV
4	PPA-I	3gbgA	0.121	0.908	2.789	threading_4	------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTSDENINVSVITIS--------DSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINY-SDEFLKVFFSGFFSKVEKKYNSIFITDDLD---AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
5	HHPRED-l	3gbg_A	0.116	0.887	3.904	threading_5	---KK------SFQTNV---YRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG---------KDLLNCEHNDIAVLSEVVNGF----RE-INYSDEFLKVFFSGFFSKVEKKYNS---IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
6	HHPRED-g	3gbg_A	0.124	0.883	3.624	threading_6	---------KKSFQT---NVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG----------LLWNCEHNDIA----VLSEVVNGFRE-INYSDEFLKVFFSGFFSKVEKKYNSI---FITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
7	SP3	3gbga	0.129	0.908	3.475	threading_7	--------KKSFQ----TNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTSDENINVSVITI--------SDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEK---KYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-
8	SAM-T99	2k9sA	0.275	0.362	3.251	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFR-------
9	MUSTER	2k9sA	0.264	0.376	1.324	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE---
10	SPARKS	2k9sa	0.264	0.376	2.043	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE---

Predicted Tertiary Structure


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TM-score=0.493 to 1xjaC SCOP code=b.82.4.1	TM-score=0.494 to 1xjaC SCOP code=b.82.4.1	TM-score=0.482 to 1xjaC SCOP code=b.82.4.1	TM-score=0.494 to 1xjaC SCOP code=b.82.4.1	TM-score=0.485 to 1xjaC SCOP code=b.82.4.1