Template-based Modeling Results for RFBX_ECOLI

Submitted Primary Sequence

>Length 415
MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC
5433122012000000001001000000000000200012100000001000000000010001100010003223233202100100000100000000000000000023113100000000000000000010001011101100001000100000000000114110000000000000000000000001212123121113101300020020000000000000000000010001200000100100020010001000200011002113223230021022001000000000000000001100100002112200100000000000000010000100112323210010000000000000000010030000000000010000000001133211011
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC
1	MUSTER	3mktA	0.113	0.983	1.239	threading_1	VHR-ASNLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAIDMAAVSIAASIWLPSILFGVG-LLMALVPVVAQLAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRTKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTEN-ALAMQLLLFAAIYQCMDAVQVVAA--SLRGYKDMRTFISYWVLGLPTGYILGMTNWLTLGAKGFWLGFIIGLSAAALMLGQRLYWLQVQLH
2	SPARKS	3mkta	0.115	0.981	2.438	threading_2	VHREASNLIKLATPVLIASVAQTGMGFVDTIMAGGV-SAIDMAAVSIAASIWLPSILFGV-GLLMALVPVVAQLAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVALAMQLLLFAAIYQCMDAVQVVAAG-SLRGYKDMTAIFHRTFISYWVGLPTGYILGQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ----
3	PROSPECT2	1b3ua	0.112	0.993	2.158	threading_3	LRNEDVQLRLNSIKKLSERTRSELLPFLVLLALAEQLGTTLVGGPEYVHCLLPPLESL--ATVEETVVRDKAVSHEHSPSDLEAHFVPLVKRLAFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLALRQAAEDKSWRVRYMVADKFTELQKAVEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCECRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMP-LLAGQLGVEFFDEKLNSLCMAWLVDHVYAAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGFNVAKSLQKIGPILDVLSLA
4	PPA-I	3g61A1	0.065	0.822	1.262	threading_4	-----------------------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV---HDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKM----LSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAVTQQLMT--
5	HHPRED-l	3mkt_A	0.115	0.986	8.813	threading_5	YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAIDMAAVSIAASIWLPSIL-FGVGLLMALVPVVAQLNGRQHKIPFEVHQGLILALLVSVPIIAV-LFQTFMDEEATVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLTFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVALAMQLLLFAAIYQCMDAVQVVA-AGSLRGYKDMTAIFHRTFISYVLGLPTGYILGTNWGAKGFWLGFIIGLSAAALMLGQRLYWLQKLH-
6	HHPRED-g	3mkt_A	0.115	0.988	8.227	threading_6	YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGG-VSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLAGRQHKIPFEVHQGLILALLVSVPIIAV-LFQTQFIREEAATVGYMVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGELGGVGCGVATAIVYWIMLLLLLFYIVTSKRVKFHKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVALAMQLLLFAAIYQCMDAVQVVAAG-SLRGYKDMTAIFHRTFISYVLGLPTGYILGTNWGAKGFWLGFIIGLSAAALMLGQRLYWLQKLHL
7	SP3	3mkta	0.117	0.990	3.013	threading_7	VHREASNLIKLATPVLIASVAQTGMGFVDTIMAGGV-SAIDMAAVSIAASIWLPSILFGV-GLLMALVPVVAQLAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMTKTVGYMHAVIFAVPAYLLFQALFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPL-GSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVALAMQLLLFAAIYQCMDAVQVVAAG-SLRGYKDMTAIFHRTFISYWVGYILGMTNWLTLGAKGFWLGFIIGLSAAALMLGQRLYWLQVQLH
8	SAM-T99	3mktA1	0.118	0.508	1.364	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVHR---YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGV-SAIDMAAVSIAASIWLPSILFGVGLLMALVPVVAQLNAGRQHKIPFEVHQGLILALLVSVPIIAVLFQT-QFIIRFMDVEEAMATKTVMHAVIFAVPAYLLFQALRS-FTDGMSLTKPAMVIGFIGLLLNIPLNWIFAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAH
9	MUSTER	3gi9C	0.138	0.945	0.997	threading_9	MELKNKKLLWEAVSMAVGVMIGASI--SIFGVGAKIAGRNL--PETFILSGIYALLVAYSYTIVSNPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLIAPINTFNIAITEIGIVAFFTALNFF---GSKAVGRAEFFIVLVKLLILGLFIFVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEIENPKVPRAIFISILIVMFVYVGVAISAIGIDELIKNALAVAA-KPFLGNLGFLLISIGALFSISSAMNATIGANVAYSLAKD-EFFERKVWFKSTEGLYITSALGVLFALLFN-------------MEGVASITSAVFMVIYLFVILSHYILIDEGGRKEIVIFSFIVVLGVFLLLLYYQWITN-RFVFYGIIATFIGVLIFEIIYRKVTKRTFS
10	SPARKS	3ny8a	0.102	0.949	0.885	threading_10	----WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLTVTNYFITSLACADLVMGLAV----VPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFASLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVIT------KDEAEKLFNQDVDAAVRGILAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF-------TNSLRMLQQKRWDEAAVNLRWYNPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIKEVYILLNWIGYVNSGFNPLIYCRQELLC

Predicted Tertiary Structure


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TM-score=0.463 to 1h2sB SCOP code=f.17.4.1	TM-score=0.458 to 1h2sB SCOP code=f.17.4.1	TM-score=0.452 to 1h2sB SCOP code=f.17.4.1	TM-score=0.602 to 1b3uA SCOP code=a.118.1.2	TM-score=0.415 to 1h6gA SCOP code=a.24.9.1