Template-based Modeling Results for RFAZ_ECOLI

Submitted Primary Sequence

>Length 283
MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN
CCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCHHHCCCCCEEEECHHHHHCHHHCCEEEEEEEECCCHHHHCHHHHHHHCCCCEEEEECHHHHHHHCCCCCEEHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN
5531310123102211443232200000100112321122032210000100011002320100000010120122223001411431200001120022114322010122011121112233211143131310120023112212103312212003102100020100000000001003111000000002110220112343302131021013002002101210330100000321202230021131320112113201311132322233325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN
1	MUSTER	2p2vA	0.194	0.876	1.031	threading_1	MEN----------ELIVSKNMQNIIIAGNGPSLKNINYKRLREYDVFRCNQFYKYYLGKKIK---AVFFNPGVFLQQYHTAKQLILKNEYEIKNIFC-----STFNLPFIESNDFLHQFYNFFPDAKLGYEVIENLKEFYAYI--------KYNEIYFNKRI--------TSGVYMCAIAIALGYKTIYLCGIDFYEGVIYPFEAMSTNIKTIFPHSKEYDIEALKLLKSIY-KVNIYALCDDSILANPLSININNNFTLENKHNNSINDLLTDNTPGVSFKN
2	SPARKS	1ro7a	0.175	0.827	1.183	threading_2	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYKYYLGKKCKAVFY---NPSLFFEQYYTLKHLIQNQEYETEL------ICSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYF--------KFHEIYFNQRITSGVYC---------AVAIALGYKEIYLSGIDFYQNGSSYAFDTKQKAPNFKNDNKNTDIKALEFLEKTY-KIKLYCLCPNSLLANF-IELAPNSNFIIQEKNNYTKDLIPSSEAYGKFSK
3	PROSPECT2	2p2vA	0.169	0.837	1.368	threading_3	RME---------NELIVSKNMQNIIIAGNGPSLKNINYKRLREYDVFRCNQFYFEDKYYLGKKIKAVFFNPGVFLQQYHTAKQLILKNEYEIKNIFC--------------------------STFNLPFIESNDFLHQFYNFFPDAKLGYEENLKEFYAYIKYNENKRITSGVYMCAIAIALGYKTIYLCGIDFYEGDVIYPFEAPGDFKPSNCHSKEYDIEALKLLKSIY-KVNIYALCDDSILINDILLTDNTPGVSFYKNQLKADNKI----------M
4	PPA-I	1ro7A	0.169	0.816	1.326	threading_4	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETE------LICSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYF--------KFHEIYFNQRITSGVY---------CAVAIALGYKEIYLSGIDFYQNGSSYAFDTKNDNSHYIGHSKNTDIKALEFLEKTY-KIKLYCLCPNSLLANFIELAPNLNSNFIIQEKSEAYGKFSKNI-------
5	HHPRED-l	1ro7_A	0.148	0.809	6.095	threading_5	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELI-CSNYN-------------Q----AHLENENFVKT----FY-DYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNRITSGVY-CAVAIALGYKEIYLSGIDFYQGSSYAFDTKQKLAPNFKNDNSHYIIKALEFLEKTY-KIKLYCLCPNSLLANFI--ELAPNLNSNILIPSSEAYGKFSKNI------
6	HHPRED-g	1ro7_A	0.150	0.827	5.551	threading_6	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELI------------------CSNYNQAHLENENFVK-----TFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFQRITSGVY-CAVAIALGYKEIYLSGIDFYQGSSYAFDTKQKLAPNFKNDSKNTDIKALEFLEKTY-KIKLYCLCPNSLLA--NFIELAPNLNSIQEKNNYTKDLIPSSEAYGKFI-
7	SP3	1ro7a	0.179	0.827	0.670	threading_7	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYKYYLGKKCKAVFY---NPSLFFEQYYTLKHLIQNQEYETELI------CSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYF--------KFHEIYFNQRITSGVY---------CAVAIALGYKEIYLSGIDFYQNGSSYAFDTKQKAPNFKNDNKNTDIKALEFLEKTY-KIKLYCLCPNSLLANF-IELAPNSNFIIQEKNNYTKDLIPSSEAYGKFSN
8	SAM-T99	1ro7A	0.159	0.802	1.734	threading_8	---------------------KKVIIAGNGPSLKEIDYSRLNDFDV--------------FRCNQFYFEDKYYLGKK---CKAVFYNPSLFFEQYYTLKHLIQNQEYETELICSNYNQAHLENENFVKTFYDYFPDAHDFFKQLKDFNAYFKFHEIYFNQRITSGVYCA---------VAIALGYKEIYLSGIDF-------YQNGSSYAFDTKQKNLLKLAPALEFLEKTY--IKLYCLCPNSLLANFIELAPNLNSNFIIQEKNNYTKDILIPSSEAYGKF
9	MUSTER	1ro7A	0.195	0.816	1.008	threading_9	---------------------KKVIIAGNGPSLKEIDYSRLNDFDVFRCNQFYKYYLGKKCKAVFY---NPSLFFEQYYTLKHLIQNQEY------ETELICSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYF--------KFHEIYFNQRITSGVY---------CAVAIALGYKEIYLSGIDFYQNSSYAFDTKKNDNSHYIGHSKNTDIKALEFLEKTY-KIKLYCLCPNSLLAN-FIELAPNLNFIIQEKNNYTKDIL---PSSEAYGK
10	SPARKS	1ymqa	0.092	0.767	0.655	threading_10	THRIPSSTIEALEAAHAK--GLKIFIATGRPKAIINNLSELQDRGYITMNGAYCFVGE---EVIYKSAIPQEEVKAMAAFCEKFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFA------DVTAKGDTKQKGIDEIIRHFGIKETMSFGDGMGQAKEDVKAAADYVTAPIDEDGISKAMKHFGII-------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.818 to 1ro7A SCOP code=c.130.1.1	TM-score=0.845 to 1ro7A SCOP code=c.130.1.1	TM-score=0.844 to 1ro7A SCOP code=c.130.1.1	TM-score=0.742 to 1ro7A SCOP code=c.130.1.1	TM-score=0.823 to 1ro7A SCOP code=c.130.1.1