Template-based Modeling Results for RFAL_ECOLI

Submitted Primary Sequence

>Length 419
MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN
54331312212211010010010000000000000010112100100000000000000120331122022100000000000000000001323311010002011200100000000000001121213110000000000000000000010002110010011101000000000000000001102211000000000000000001301000000000000000011121122000000000000000001023202210230121022123432200100000002000200230111220231113102110232321300120121100010020013201000000000000000101332120000000000001002010103200000000000000113333334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN
1	MUSTER	1wa5B	0.125	0.936	1.017	threading_1	ALA--KRRNFLPQMTQQLNS-MQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGTDYRDYVLQCAMEPILGLPSLIRTATWTLSNLCRGKPDWSVVSQALPTLAKLITETLVDACWAISYLSDQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVT---GNDLQTQVVINAGVLPALRLLLSSPK-ENIKKEACWTISNITAGNTEQIQAVIDALIPPLVKLLEVAE-----YKTKKEACWAISN---ASSGGLQ------RPDIIRYLVSQGCIKPLCDLLEINRIIEVTLDALENILKMGEADKEARGLNI-----NENADFIEKAGGMEKIFNCQQNE-N
2	SPARKS	2xwub	0.084	0.995	1.492	threading_2	RIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNESSLTLTFWYTLQDDILEAEKQAVYQQVYRPVYFQLVDVLLHKADEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETIDVPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPVVVLQQVFQLIQKVLSKWLNDAQVVE--AVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDH
3	PROSPECT2	1jdha	0.075	0.981	2.103	threading_3	AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIARCTAGTLHNLSHHREGLLAIFKSGGIPALVVLFYAITTLHNLLLHQEGQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA---LRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRARMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYS-----PIENIQRVAAGVLCELAQDKEFRMS
4	PPA-I	3g61A1	0.061	0.816	1.481	threading_4	-VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNS------------------------------------TNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQE-IGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKEL-------EGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFS-YAACFRFGAYLVTQQMT-------------------------------
5	MUSTER	1ialA	0.088	0.919	1.006	threading_5	MLVNWSVEDIVK-GINSNNLESQLQATQAARKLLSR--EKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDG-------SAFRDLVIKHGAIDPLLALLAV--PDLS-----TLACGYLRNLTWTLSNLC-----RNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTD----GPNERIEMVVKKGVVPQLVKLLGATE-LPIVTPALRAIGNIVTGT---DEQTQKVIDAGALAVFPS--LLTNPKTNIQKEATWTMSNAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK--DTKIIQVILDAISNIFQAAEKLGETE
6	SPARKS	2bkub	0.077	0.955	1.296	threading_6	ELMKIMVDNTGAEKRASLLALGYMCESNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAT---------QAEDICLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQ--SPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGP----DKVQRTYYVHQALPSILNLMN---DQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNC-SWTIINLVEQLAEATPSPIYNFYPALVDGLIGAARIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDEN
7	PROSPECT2	1b3ua	0.095	1.000	1.962	threading_7	ELLPFLTDTIYDEDEVLLALAEQLEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAFTSRTSACGLFSVCYPRVSSYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMSHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLALPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLTTLFCINVLSEVCGQDITTKHMLPTVLVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVSLA
8	PPA-I	1wa5B	0.096	0.921	1.289	threading_8	LAKRRNFQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-------------------NSNKPSLIRTATWTLSNLCR-----GKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDG--PQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVT------GNDLQTQVVINAGVLPALRLL-LSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMARGLNIN
9	SPARKS	3m1ic	0.102	0.983	1.245	threading_9	ILTKFQAWQKADQILQFSTNPQSKFIALSILDKLITWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWP---EFIPELIGSSSSSVNVCENNMIVLKLLSEEQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGIPYRYIYETNILELLSTKFMTRAITLKCLTEVDNDLIKRQTVLFFQNTLQQIATSVMP--VTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWWHNINTLSWAIGSISGTM--SEDTEKRFVVTVIKDLLDLTVKKRGK
10	PROSPECT2	3a6pA1	0.068	0.955	1.917	threading_10	AMDQVNMMDPNSTQRYRLEALKFCEEFKICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMLSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADVFLKRLCQVLCALALLGADSDVETPSNFGKYLESFLAFTTHPSQ--FLRSSTQMTWGALFRHEILSRDPLLL---AIIPKYLRASMTNPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRL--------DPKTSFQMAGEWLKYQL------STF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.868 to 1wa5B SCOP code=a.118.1.1	TM-score=0.400 to 1h6gA SCOP code=a.24.9.1	TM-score=0.627 to 1m8xA SCOP code=a.118.1.8	TM-score=0.659 to 1xm9A SCOP code=a.118.1.24	TM-score=0.430 to 1h6gA SCOP code=a.24.9.1