Template-based Modeling Results for RFAB_ECOLI

Submitted Primary Sequence

>Length 359
MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK
CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK
21000002101121000100110021034241100000013444223211321200011232311112103102000300332201000001000000001012302130100001101111221010021010000002101210242112421000001102033122323333321100000103233232031002000313230100000202103201200540303110000022311131021003300000000212100100000010100000010211021002231100002121120002001300213221322301110231112200320130022112434
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK
1	MUSTER	2jjmL	0.183	0.942	2.391	threading_1	LKIGITCYP----GGSGVVGTELGKQLAERGHEIHFITSGLPK-----VYPNIYFHEVTVNFQYPP-YDLALASKMAEVAQRENLDILHVHYIPHAICAYLAKQMIGERIKIVTTLHGTSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQGISKILIHISNF--RKVKRVQDVVQAFAKIVVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDHRNMGERARESVYEQFRSEKIVSQYETIYYDVL----
2	SPARKS	3mboa	0.172	0.972	4.300	threading_2	MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFVYPNIYFHEVTVN--QYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIHAICAYLAKQMIGERIKIVTTLHDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTSESEKILIHISNFR--KVKRVQDVVQAFAKIEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD-
3	PROSPECT2	2jjmA	0.186	0.942	3.574	threading_3	LKIGITCYP----GGSGVVGTELGKQLAERGHEIHFITSGLPKV------YPNIYFHEVTVNFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYAKQMIGERIKIVTTLHDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTYGISKILIHISNFR--KVKRVQDVVQAFAKIEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRERARESVYEQFRSEKIVSQYETIYYDVL----
4	PPA-I	2jjmL	0.180	0.942	3.424	threading_4	LKIGITCYP----GGSGVVGTELGKQLAERGHEIHFITSGLPKVYPNI------YFHEVTVNFQYPPYDLALASKMAEVAQRENLDILHVHYAPHAICAYLAKQMIGERIKIVTTLHDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQGISKILIHISNF--RKVKRVQDVVQAFAKIVVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDHRNMGERARESVYEQFRSEKIVSQYETIYYDVL----
5	HHPRED-l	3c48_A	0.141	0.967	3.254	threading_5	MRVAMISMHTSP--GMNVYILSTATELAKQGIEVDIYTRATRPSQIVRVAENLRVINIAAGPYEELPQLAAFTGGMLSFTEKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVRRICEQQLVDNADVLAVNTQEEMQDLMHYDADPDRISVVSPGADVELYSPG---GIPLHTKVVAFVGRLQPFKGPQVLIKAVAALDPDRNLRVIICGGPS---RHMAEEL--GVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAAR-VGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIREDAVEHARTFSWAATAAQLSSLYNDAIANE-
6	HHPRED-g	3c48_A	0.151	0.961	2.676	threading_6	MRVAMISMHLQ---GMNVYILSTATELAKQGIEVDIYTRATRPGEIVRVAENLRVINIAAGPYELPTQLAAFTGGMLSFTRKVTYDLIHSHYWLSGQVGWLLRDLWR--IPLIHTAHTLAARICEQQLVDNADVLAVNTQEEMQDLMHHDADPDRISVVSPGADVELYSPG--IPLHTKVVAFVGRLQ--PFKGPQVLIKAVAALDPDRNLRVIICGG--DTYRHMAEELGVEKRIRFLDPRPP--SELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV-GGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAHARTFSWAATAAQLSSLYNDAIANEN
7	SP3	3mboa	0.175	0.972	4.563	threading_7	MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFVYPNIYFHEVTVN--QYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIHAICAYLAKQMIGERIKIVTTLHGTSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTSESEKILIHISNF--RKVKRVQDVVQAFAKIEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTR-VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD-
8	SAM-T99	2jjmL	0.187	0.922	4.384	threading_8	-----------YPGGSGVVGTELGKQLAERGHEIHFITSGLPKVYPNIYFHEVTVNFQY------PPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYAKQMIGERIKIVTTLHGTDLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKLKKEYGISKILIHISNFR--KVKRVQDVVQAFAKIEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERAREEQFRSEKIVSQYETIYYDVL----
9	MUSTER	2gekA	0.157	0.942	2.155	threading_9	MRIGMVCPSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHV------KLPDYVVSGGKAVFG----PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE--GPIVATFHTSVFQGILRPYHEKIIGRIAVSDLARRWQMEAL--GSDAVEIPNGVDVASFPLLDGYPREGRTVLFLGRYD-EPRKGMAVLLAALPKLVPDVEILIVGRGDEDELREQAG---DLAGHLRFLGQVD--DATKASAMRSADVYCAPHLGESFGIVLVEAMAAGTAVVASDL-DAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERRYDWSVVSAQIMRVYETVSGAGI
10	SPARKS	2jjma	0.183	0.942	4.053	threading_10	LKIGITCYP----GGSGVVGTELGKQLAERGHEIHFITSGLPKVYPNIYFHEVTV------NFQYPPYDLALASKMAEVAQRENLDILHVHYAIHAICAYLAKQMIGERIKIVTTLHGTDINNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMEYGISKILIHISNFR--KVKRVQDVVQAFAKIEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDN----VAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDHRNMGERARESVYEQFRSEKIVSQYETIYYDVL----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.760 to 2bisA SCOP code=c.87.1.8	TM-score=0.752 to 2bisA SCOP code=c.87.1.8	TM-score=0.755 to 2iw1A SCOP code=c.87.1.8	TM-score=0.756 to 2bisA SCOP code=c.87.1.8	TM-score=0.762 to 2bisA SCOP code=c.87.1.8