Template-based Modeling Results for RATA_ECOLI

Submitted Primary Sequence

>Length 158
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
CEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEECCCEEEEEECCCCHHEEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
30000001113121120111010211031002001102101310210210200222332020101002210112000202023321021201301111020001011134310201010001021400110002003200220020002202322334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR
1	MUSTER	1t17A	0.315	0.905	3.512	threading_1	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKDRSIDVSLLYGPFKRLNNGWRFMPE-GDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
2	SPARKS	1t17a	0.315	0.905	4.529	threading_2	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKDASIDVSLLYGPFKRLNNGWRFMPEG-DATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
3	PROSPECT2	3tfzA	0.192	0.924	2.651	threading_3	------------HMRHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRDLDPARAYRQLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRADEAREMLEAVVERNSVADLNAVLGEAERRVGTV
4	PPA-I	1t17A	0.315	0.905	6.450	threading_4	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKDASIDVSLLYGPFKRLNNGWRFMPEG-DATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
5	HHPRED-l	1t17_A	0.315	0.905	3.680	threading_5	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGVDAEAQVGFSFLREKFATRVRRDDARSIDVSLLYGPFKRLNNGWRFMPEGD-ATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
6	HHPRED-g	1t17_A	0.315	0.905	4.484	threading_6	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKARSIDVSLLYGPFKRLNNGWRFMPEGD-ATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
7	SP3	1t17a	0.315	0.905	4.407	threading_7	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKDRSIDVSLLYGPFKRLNNGWRFMPE-GDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHGA-
8	SAM-T99	1t17A	0.296	0.899	4.771	threading_8	-------------MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDTVDAEAQVGFSFLREKFATRVRRDKDARIDVSLLYGPFKRLNNGWRFMPEGDA-TRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQQLHG--
9	MUSTER	2d4rA	0.150	0.886	3.004	threading_9	--------------PEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAGK-KVRWLEEEEWDDENRNRFFSPEGDFDRYEGTWVFLPE-GEGTRVVLTLTYELTIPIFLRKLVQKLQENVESLLKGLEERVLAASS--
10	SPARKS	3tfza	0.199	0.924	3.859	threading_10	------------HMRHVEHTVTVAAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRDLDPARVIAYRQLETIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAEMLEAVVERNSVADLNAVLGEAERRVRAAGGVG

Predicted Tertiary Structure


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TM-score=0.927 to 1t17A SCOP code=d.129.3.6	TM-score=0.929 to 1t17A SCOP code=d.129.3.6	TM-score=0.920 to 1t17A SCOP code=d.129.3.6	TM-score=0.817 to 2rezA SCOP code=d.129.3.6	TM-score=0.928 to 1t17A SCOP code=d.129.3.6