Template-based Modeling Results for REQ2_ECOLI

Submitted Primary Sequence

>Length 250
MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCEEEECEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
5313201321013123112212020211020100000100020202100000002022321310020002001221332012124311110010000000021022112414032021211221221112224524211222212110331413020222042041202022222142431211110230313312302121012001310230222201200120002002101212121322133225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR
1	PROSPECT2	2p7nA	0.088	0.952	1.126	threading_1	PALAAARAAFSGGEPPARREAPGAELDEARNAQTVSARLFEG------NLKGVAQSGHASAEQKQALQSGLDDVFADDQIGKIKDNYLGVYENVVGQYTFSDILSQANWIKLSLGDNLDNKKAVLFPAQSKDGGIQGGSESDARKWAKEGLPDAPPPGFSCVQKAADGNWVVVVDTPIDTIRDVGALGS-GTLELDNAKFQAWQSGFKAQ-----EENLKNTLQTLTQKYSNANSLFDNLVKVLSSTIST
2	SPARKS	2ctta	0.204	0.372	1.903	threading_2	----------------------------------------------------------------------------------------GSSGSSGMELTFNQAAKGVNKMDTCERCNGKGNEPGTKVQHCHYCGGSGNTGPFVMRSTCRRCGGRGSIISPCVVCRGAGQAKQKKRSGPSSG---------------------------------------------------------------------
3	PROSPECT2	3qxyA	0.112	1.000	1.108	threading_3	LPVACFLSELSPKVAVSRQGTVAGSQHTCSIGGLLVALQSQSGWVPLLLALLHELQAPASREKDLANIRSEYQSIVLPFMEAHPDLFSLRVLELYHQLVALVMAYSFQEPLEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEVEPYPDNTDDTADIQCKLEMVGEEGAFVIGRREEGSLTITNIPQLLQNSVLLTLQTYADQGLLSNKEVYAKQQALQVRYGQKMILHQLLELTS
4	PPA-I	2cttA	0.204	0.372	1.375	threading_4	----------------------------------------------------------------------------------------GSSGSSGMELTFNQAAKGVNKEFTCERCNGKGNEPGTKVQHCHYCGGSGNTGPFVMRSTCRRCGGRGSIISPCVVCRGAGQAKQKKRSGPSSG---------------------------------------------------------------------
5	PROSPECT2	1m5ya	0.084	0.952	1.077	threading_5	VDMQSVKLNAAQARQQLPD------------DATLRHQIMERLIMDQIILQMGQKMGVKSDEQLDQAIANIAKQNNMSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQQVTELNLSHILIPLPENPTQALNGGQMGWGRTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAGKTTFAAAAKEFPAFRDALMLMNRKFSEEAASWMQEQLS
6	HHPRED-l	1nlt_A	0.158	0.608	4.430	threading_6	-------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVQRFQTECDVCHGTGDIKDRCKSCNGKKVENERKILVEPGMKDGQRI-VFKGEADQDVIPGDVVF----IVSERPHKSFKRDGDDLV------YEAEIDLLTAIAGGEF-
7	PROSPECT2	1ct9a1	0.109	0.952	1.066	threading_7	RDWFDYDAVKDNVTDLMSDVPYGVLLSGGLDSSIISAITKKYALHSFAVG-----LPGSPDLKAAQEVANHGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYD-CARANKAMSAWGV------EARVPFLDKKFLDVAMRINPQKMCKMEKHILRECFEAYLPDGVGYSWIDTLKEVAAQQVSDQQLETARFPSAAECVPG
8	HHPRED-g	1nlt_A	0.169	0.616	4.451	threading_8	-------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVQRFQTECDVCHGTGDIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQIPGDVVFIVSERPHKSFK----RDGDDLV------YEAEIDLLTAIAGGEFA
9	MUSTER	3cucB	0.083	0.964	0.661	threading_9	SNIKQLYSKWK-SLQPLKPEDLKRWNDKFKLEFNYNSNHLEGNTLTY-GQTKLLLFGETSGNASLKDYEEKAHNVGLEIKQEAQDKERPLTESFIRELNRTILVQDYWIKVGEYKSRPNSVLTATGEVFSYASPEETPAFTSLVKGILTPVELAALLHYRYIRIHGNGRILVNFVLHRYGYPIVIHSED-------KSNYLNILHQCDVEAGLTPSDGANATILPFVNYLSSCLIRSLTLAIKAAKESIE
10	SP3	2ctta	0.204	0.372	1.631	threading_10	----------------------------------------------------------------------------------------GSSGSSGMELTFNQAAKGVNKMDTCERCNGKGNEPGTKVQHCHYCGGSGETINFVMRSTCRRCGGRGSIISPCVVCRGAGQAKQKKRSGP--SSG-------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.417 to 2j0oA SCOP code=a.250.1.1	TM-score=0.399 to 1exkA SCOP code=g.54.1.1	TM-score=0.440 to 1p0yB SCOP code=a.166.1.1	TM-score=0.328 to 1exkA SCOP code=g.54.1.1	TM-score=0.433 to 1m5yD SCOP code=a.223.1.2