Template-based Modeling Results for QSED_ECOLI

Submitted Primary Sequence

>Length 303
MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS
442111211102020010000014122112003213001000121032004211120021311201003202201210230032022002103202322322010000100010000200120142021001101032002203313000000012331242301002003220000000232132223222330200002330210200120023223121210010110200120023100000001000121142120010134312220100001232311200220031022133225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS
1	MUSTER	3hhgE	0.213	0.960	3.025	threading_1	MKT--------NSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPEKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLD-AQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDTHPFNAVYYDKAVNLRLRVFLDFLVEELGNL-
2	SPARKS	3szpa	0.175	0.941	6.048	threading_2	----------MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQADDLDPTEWDVIFRVG--PQRDSSLIARKIGEVKDILVASPQSHPQPTHAEELHQHQLLKGYPLLK---WQLTNSQGETVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHDHQPEKVRLFIDFVIGYHL---
3	PROSPECT2	3fxqA	0.169	0.957	3.965	threading_3	----------LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANATRLALQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYLRRHDLPVTPAAAGLIRWIQHHA---L
4	PPA-I	3hhgE	0.205	0.964	5.160	threading_4	--------MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPEKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLD-AQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKHPFNAVYYDKAVNLRLRVFLDFLVEELGNNL
5	HHPRED-l	1al3_A	0.123	0.673	3.532	threading_5	-----------------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFIERYPLHMHQGSPTQIAEAVSKGNADFAIATEALH-LYDDLVMLPCYHWNRSIVVTPEHPLGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAG-LTPRIVFTATDADVIKTYVRLGLGVGVIASMAVD-PVSDPDLVKLDANGIFSHSTTKGFRRSTFLRSYMYDFIQRFAPHLTAV-
6	HHPRED-g	1al3_A	0.132	0.677	3.024	threading_6	-----------------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALH-LYDDLVMLPCYHWNRSIVVTPEHPLATKGSVSLAQYPLVTYTFGFTGRSELDTAFNRAG-LTPRIVFTATDADVIKTYVRLGLGVGVIASMAV-DPVSDPDLVKLDANGIFSHSTTKGFRRSTFLRSYMYDFIQRFAPHLVALR
7	SP3	3szpa	0.175	0.941	6.015	threading_7	----------MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQADDLDPTEWDVIFRVG--PQRDSSLIARKIGEVKDILVASPQSHPQPTHAEELHQHQLLKGYPLLK---WQLTNSQGEVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHDHQPEKVRLFIDFVIGYHL---
8	SAM-T99	3hhgE	0.197	0.954	4.111	threading_8	----------MKSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPIRLSLVSSEGYINLIERK-VDIALRAGE--LDDSGLRARHLFDSRFRVIASPEYHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDA-QGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSKTHPFNAVYYDKAVNLRLRVFLDFLVEELGNNL
9	MUSTER	3szpA	0.179	0.941	2.984	threading_9	MK----------LDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQADDLDPTEWDVIFRVG--PQRDSSLIARKIGEVKDILVASPQSHPQPTHAEELHQHQLLKGYPLLK---WQLTNSQGETVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHDHQPEKVRLFIDFVIGYHL---
10	SPARKS	1iz1a	0.162	0.937	4.560	threading_10	----------MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTKDEQVEGLLAGTIHVGFSRFFPR--HPGIEIVNIAQEDLYLAVHRSKFGKTCKLADLRAVELTLFPRGGSFADEVIGLFKHAG-IEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVGT--RVKVPISCIFRKEKQPPILARFVEHVRRSA----

Predicted Tertiary Structure


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TM-score=0.667 to 2esnC SCOP code=a.4.5.37	TM-score=0.671 to 2esnC SCOP code=a.4.5.37	TM-score=0.656 to 2esnC SCOP code=a.4.5.37	TM-score=0.665 to 2esnC SCOP code=a.4.5.37	TM-score=0.671 to 2esnC SCOP code=a.4.5.37