Template-based Modeling Results for QSEC_ECOLI

Submitted Primary Sequence

>Length 449
MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
55233420130000000000000000000000022002101200121012002100311233132233223112213223233210000001331200011131133122223331001020113312000000112323010000122320220032012011212211211121111100032110023002103322332222032220221022002001300220230121112001100220100000021001102323322311330023022102201200120010031222332332220003200210022013103415020102032220211001200010010002100410142120201011210202121220133002200210121213222000000000120042130202011134200102012
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
1	SP3	3a0ra	0.174	0.717	3.419	threading_1	-------------------------------------------FSESILESLETAIITLSKDGRI--TEWNKKAEQLFGLKKENVL--------GRRLK---DLPDFEEIGSVAESVFE-----NKEPVFLNFYKFGERYFNIRFSPFRNAKTQLL----------EGVIITI-------------------------DDVTELYKYEEERKRRE-----------------RLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKERVL----EFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMRVSVWNSGPPIPEELKEKIFSPFF---------TTLGLSICRKIIEEHGGKIWTEN-RENGVVFIFEI
2	SAM-T99	3a0rA	0.175	0.702	3.434	threading_2	FSESILESL---------------------------------------------------------------------------ETAIITLSKDGRITEWNK----KAEQLFGLKKENVLGRRLKDLP----------GSVAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILG-----------------------------EMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSK----ERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSTKVRVSVWNSGPPIPEELKEKIFSPFFTT---------LGLSICRKIIEEHGGKIWTENRENG---VVFIF
3	SPARKS	3d36a	0.201	0.465	3.825	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAEAIITDYLTFAKPAPE----TPEKLNVKLEIERVIDILRPLANMSCVDIQAT--LAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDLIRIADTGVGMTKEQLERLGEPYFT--TKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYL
4	MUSTER	3a0rA	0.170	0.679	1.373	threading_4	-----------------------------------------------------------------------------FSESILESLAIITLSKDGRITE-KKELGRRLKDLPDFEEIGSVSVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLE----------GVIITI-------------------------DDVTELYKYEEER-----------------KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKERV----LEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMRVSVWNSGPPIPEELKEKIFSPFF---------TTLGLSICRKIIEDEGGKIWTENR-ENGVVFIFEI
5	PROSPECT2	1jm6a	0.124	0.682	2.304	threading_5	ASLA---GAPKYIEHFSKFSPSPLSMKQFLDFGACEKTSFTFLRQELPVRLANIMKEINLLP---------------------------------------------------------------------------------------------------------------DRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPED------------------------HRTLSQFTDALVTIRNRHNDVVPTMAQGVL--EYDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDPKHIGSI--DPNCSVSDVVKDAYDMAKLLCDKYIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRASLTLPPIKIMVALGSIKMSDRGGGVPLRKIERLFSYMYS-TAPTPAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYY
6	PPA-I	3dgeA	0.297	0.488	3.060	threading_6	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWI
7	HHPRED-l	2c2a_A	0.293	0.501	4.753	threading_7	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME----N-----VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKLIIVEDNGIGIPDHAKDRIFEQFYRVD------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVW-
8	HHPRED-g	2c2a_A	0.301	0.503	3.952	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN--V-TE--------SKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEVLIIVEDNGIGIPDHAKDRIFEQFYRVD------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWI
9	SP3	2c2aa	0.292	0.503	4.039	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN--VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKLIIVEDNGIGIPDHAKDRIFEQFYRV------DTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWI
10	SAM-T99	3dgeA	0.301	0.488	4.971	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.534 to 1ys3B SCOP code=d.122.1.3	TM-score=0.526 to 1ys3B SCOP code=d.122.1.3	TM-score=0.531 to 1ys3B SCOP code=d.122.1.3	TM-score=0.530 to 1ys3B SCOP code=d.122.1.3	TM-score=0.538 to 1ys3B SCOP code=d.122.1.3